Parental gene:

NIPA2, ENSMMUG00000003892

Aliases:None
Description:magnesium transporter NIPA2 [Source:RefSeq peptide;Acc:NP_001181815]
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:7:1784475..1819390(-)


>ENSMMUG00000003892
ATGAGCCAGGGGCGTGGAAAATATGACTTCTATATTGGTCTGGGATTGGCTATGAGCTCCAGCATTTTCATTGGAGGAAG
TTTCATTTTGAAAAAAAAAGGCCTTCTTCGACTTGCCAGGAAAGGCTCTATGAGAGCAGGTCAAGGTGGCCATGCATATC
TTAAGGAATGGTTGTGGTGGGCTGGACTGCTGTCAATGGGAGCTGGTGAGGTGGCCAACTTTGCTGCGTATGCGTTTGCA
CCAGCCACGCTAGTGACTCCACTCGGAGCTCTCAGTGTACTAGTAAGTGCCATTCTTTCTTCATACTTTCTAAATGAAAG
ACTTAATCTTCATGGGAAAATTGGGTGTTTGCTAAGTATTCTAGGATCTACAGTTATGGTCATTCATGCTCCAAAGGAGG
AGGAGATTGAGACTTTAAATGAAATGTCTCACAAGCTGGGTGATCCAGGTTTTGTGGTCTTTGCAACCCTTGTGGTCATT
GTGGCCTTGATACTAATCTTCGCGGTGGGTCCTCGCCATGGACAGACAAACATTCTTGTGTACATAACAATCTGCTCTGT
GATCGGCGCCTTTTCAGTGTCCTGTGTGAAGGGCCTGGGCATTGCTCTCAAGGAGCTGTTTGCTGGAAAGCCTGTGCTGC
GGCATCCCCTGGCTTGGGTTCTGCTGCTGAGCCTCATCGTCTGCGTGAGCACACAGATTAATTACCTAAATAGGGCCCTG
GATATATTCAACACTTCCATTGTGACTCCAATATATTATGTATTCTTTACAACATCAGTTTTAACTTGTTCAGCTATTCT
TTTTAAGGAGTGGCAAGATATGCCCGGTGACGATGTCATTGGTACTTTGAGCGGCTTCTTTACAATCATTGTGGGGATAT
TCTTGTTGCATGCCTTTAAAGACGTCAGCTTTAGTCTAGCAAGTCTGCCTGTATCTTTTCGAAAAGACGAGAAAGCAGTG
AATGGCAATCTCTCTAATATGTATGAAGTTCTTAATAATAATGAAGAAAGCTTAACCTGTGGAATCGAACAACACACTGG
TGAAAATGTCTCCCGAAGAAATGGAAATCTGACAGCTTTTTAA

Library Parental gene expression (RPM)
SRP007412_brain 30 .48 RPM
SRP007412_brain_prefrontal_cortex 31 .18 RPM
SRP007412_cerebellum 27 .96 RPM
SRP007412_heart 14 .07 RPM
SRP007412_kidney 27 .23 RPM
SRP007412_liver 11 .24 RPM
SRP007412_testis 15 .45 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000013824 ortholog_one2one 1 retrogene
retro_amel_1163,
Choloepus hoffmanni ENSCHOG00000005553 ortholog_one2many 1 retrogene
retro_chof_9,
Callithrix jacchus ENSCJAG00000005448 ortholog_one2one 1 retrogene
retro_cjac_1506,
Equus caballus ENSECAG00000006379 ortholog_one2one 1 retrogene
retro_ecab_656,
Felis catus ENSFCAG00000023073 ortholog_one2one 1 retrogene
retro_fcat_246,
Macaca mulatta ENSMMUG00000018625 within_species_paralog 1 retrogene
retro_mmul_638,
Mus musculus ENSMUSG00000030452 ortholog_one2one 1 retrogene
retro_mmus_3551,
Oryctolagus cuniculus ENSOCUG00000010746 ortholog_one2one 3 retrogenes
retro_ocun_1581, retro_ocun_773, retro_ocun_809,
Ictidomys tridecemlineatus ENSSTOG00000004003 ortholog_one2many 3 retrogenes
retro_itri_1847, retro_itri_347, retro_itri_388,
Vicugna pacos ENSVPAG00000000671 ortholog_one2one 1 retrogene
retro_vpac_285,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_1510 64.71 50.56
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Download FASTA sequences of all ENSMMUG00000003892 retrocopies