Parental gene:

Nipa2, ENSMUSG00000030452

Aliases:Nipa2, 2600017P10Rik, 3830408P04Rik, AB041581
Description:non imprinted in Prader-Willi/Angelman syndrome 2 homolog (human) [Source:MGI Symbol;Acc:MGI:1913918]
Organism:Mouse (Mus musculus)
Coordinates:7:55931286..55962476(-)


>ENSMUSG00000030452
ATGAGCCTGGGGCGTGGAAAATATGATTTTTATATTGGTCTGGGATTGGCTATGACCTCCAGCATTTTCATTGGAGGGAG
TTTCATTTTGAAAAAAAAAGGCCTTCTGCGACTTGCCAGGAAAGGCTCAATGAGAGCAGGTCAAGGAGGCCATGCATATC
TTAAGGAATGGTTGTGGTGGGCTGGACTGCTGTCAATGGGAGCCGGTGAAGTGGCCAATTTTGCTGCATATGCATTTGCT
CCGGCCACATTAGTGACTCCACTAGGTGCGCTCAGCGTCCTCGTAAGTGCCATTCTGTCTTCATACTTCCTAAATGAAAG
ACTTAATCTTCATGGGAAAATTGGGTGTTTGCTAAGTATTCTAGGGTCTACAGTTATGGTCATTCATGCTCCAAAGGAAG
AGGAGATTGAGACCTTAAATGAAATGTCACATAAGTTAGGTGATCCAGGTTTTGTGGTCTTTGCAACATTTGTGGTCATT
GTGGCCTTGATATTCATCTTTGTGGTGGGACCTCGACATGGACAGACAAACATTCTTGTGTATATAACAATCTGCTCTGT
GATTGGAGCATTTTCAGTCTCCTGTGTGAAGGGTTTGGGTATCGCCATAAAAGAGTTGTTGGCTGGAAAGCCTGTTCTGC
AGCACCCCCTCGCCTGGATTCTTCTGTTTAGCCTTGTGGTCTGTGTGAGCACACAGATTAATTACCTAAACCGGGCTCTG
GACATTTTCAACACTTCCATTGTGACTCCAATATATTATGTGTTCTTTACAACTTCAGTTTTGACTTGTTCAGCTATTCT
TTTTAAAGAATGGCAGGATATGCCTGTTGATGATGTCATTGGGACTTTGAGTGGCTTCTTCACAATCATTGTGGGGATAT
TTTTGTTGCATGCCTTTAAAGATGTCAGTTTTAGTCTAGCAAGTCTGCCAGTATCTTTTCGAAAAGATGAAAAGGCAATG
AATGGCAATCTTTCTAGTATGTATGAAGTTCTTAATAATAATGAAGACGACTTACCCTGTGGAATTGAACACACTGGTGA
AAATATTTCCCGTAGGAATGGAAATCTGCCATCTTTTTAA

Library Parental gene expression (RPM)
SRP007412_brain 24 .34 RPM
SRP007412_cerebellum 15 .20 RPM
SRP007412_heart 16 .78 RPM
SRP007412_kidney 23 .73 RPM
SRP007412_liver 22 .23 RPM
SRP007412_testis 9 .65 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000013824 ortholog_one2one 1 retrogene
retro_amel_1163,
Choloepus hoffmanni ENSCHOG00000005553 ortholog_one2many 1 retrogene
retro_chof_9,
Callithrix jacchus ENSCJAG00000005448 ortholog_one2one 1 retrogene
retro_cjac_1506,
Equus caballus ENSECAG00000006379 ortholog_one2one 1 retrogene
retro_ecab_656,
Felis catus ENSFCAG00000023073 ortholog_one2one 1 retrogene
retro_fcat_246,
Macaca mulatta ENSMMUG00000003892 ortholog_one2one 1 retrogene
retro_mmul_1510,
Oryctolagus cuniculus ENSOCUG00000010746 ortholog_one2one 3 retrogenes
retro_ocun_1581, retro_ocun_773, retro_ocun_809,
Ictidomys tridecemlineatus ENSSTOG00000004003 ortholog_one2many 3 retrogenes
retro_itri_1847, retro_itri_347, retro_itri_388,
Vicugna pacos ENSVPAG00000000671 ortholog_one2one 1 retrogene
retro_vpac_285,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_3551 91.49 91.36
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Download FASTA sequences of all ENSMUSG00000030452 retrocopies