Parental gene:

APOOL, ENSMMUG00000004335

Aliases:None
Description:None
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:X:83811538..83892582(+)


>ENSMMUG00000004335
ATGGCGGCCATCAGGATGGGAAAACTGACAACCATGCCTGCAGGTCTGATATATGCATCTGTAAGTGTACATGCAGTCAA
AGAAGAGGAATCCAAAAAGCAGCTAGTGAAACCAGAGCAGCTCCCTATATATACTGCACCACCGCTTCAGTCTAAATATG
TTGAAGAGCAGCCTGGTCATTTACAAATGGGTTTTGCTTCCATCCGGACTGCAACTGGTTGTTATATTGGCTGGTGCAAG
GGTGTTTATGTCTTTGTGAAAAATGGGATAATGGATACAGTACAATTTGGAAAAGATGCTTATGTCTATCTGAAGAATCC
TCCTCGAGACTTTCTTCTGAAAATGGGAGTTATTACAGTTTCAGGATTGGCGGGCTTGGTTTCAGCGAGAAAAGGTTCCA
AGTTTAAGAAAATTACTTATCCTCTGGGACTGGCCACTTTAGGAGCAACTGTTTGCTACCCAGTTCAGTCCATAATAATT
GCTAAGGTAACAGGGAAAAAGATATATGCTACAAGCCAGCAAATTTTTGGAGCAGTTAAATCACTGTGGAAAAAAAGCAG
CAAAGAAGAGTCACTCCCTAAACATAAAGAAAAAACTAAGCTAGGATCCTCTGTCGAAATAGAAGTACCTGCAAAAACAA
CTGACGTCTTGAAACACTCAGTGCCCTTGCCAACAGAACTCAGCTCTGAAGCGAAGACCAAATCAGAATCCACTTCAGGT
GCAACACAGTTTATGCCTGACCCCAAGCTCATGGATCACGGGCAGTCCCACCCAGAAGATATAGATATGTACAGCACTAG
AAGCTGA

Library Parental gene expression (RPM)
SRP007412_brain 7 .28 RPM
SRP007412_brain_prefrontal_cortex 6 .82 RPM
SRP007412_cerebellum 6 .13 RPM
SRP007412_heart 8 .89 RPM
SRP007412_kidney 11 .15 RPM
SRP007412_liver 5 .23 RPM
SRP007412_testis 1 .13 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000000829 ortholog_one2one 1 retrogene
retro_amel_1035,
Canis familiaris ENSCAFG00000017383 ortholog_one2one 1 retrogene
retro_cfam_1490,
Callithrix jacchus ENSCJAG00000008249 ortholog_one2one 2 retrogenes
retro_cjac_1783, retro_cjac_2464,
Dipodomys ordii ENSDORG00000011045 ortholog_one2one 1 retrogene
retro_dord_373,
Equus caballus ENSECAG00000009229 ortholog_one2one 1 retrogene
retro_ecab_577,
Homo sapiens ENSG00000155008 ortholog_one2one 1 retrogene
retro_hsap_3253,
Gorilla gorilla ENSGGOG00000016329 ortholog_one2one 1 retrogene
retro_ggor_2213,
Loxodonta africana ENSLAFG00000008844 ortholog_one2one 1 retrogene
retro_lafr_1035,
Microcebus murinus ENSMICG00000015844 ortholog_one2one 1 retrogene
retro_mmur_1511,
Myotis lucifugus ENSMLUG00000011384 ortholog_one2one 1 retrogene
retro_mluc_1364,
Macaca mulatta ENSMMUG00000016361 within_species_paralog 4 retrogenes
retro_mmul_1584, retro_mmul_1886, retro_mmul_2051, retro_mmul_814,
Mustela putorius furo ENSMPUG00000001899 possible_ortholog 3 retrogenes
retro_mputfur_606, retro_mputfur_734, retro_mputfur_874,
Nomascus leucogenys ENSNLEG00000002634 ortholog_one2one 1 retrogene
retro_nleu_1702,
Pongo abelii ENSPPYG00000020516 ortholog_one2one 1 retrogene
retro_pabe_2697,
Pan troglodytes ENSPTRG00000022067 ortholog_one2one 1 retrogene
retro_ptro_2200,
Sus scrofa ENSSSCG00000012459 ortholog_one2many 1 retrogene
retro_sscr_610,
Tursiops truncatus ENSTTRG00000000429 ortholog_one2one 1 retrogene
retro_ttru_1337,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_2045 83.40 97.76
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Download FASTA sequences of all ENSMMUG00000004335 retrocopies