Parental gene:

APOOL, ENSPTRG00000022067

Aliases:None
Description:apolipoprotein O-like [Source:HGNC Symbol;Acc:24009]
Organism:Chimpanzee (Pan troglodytes)
Coordinates:X:84985967..85069388(+)


>ENSPTRG00000022067
ATGGCGGCCATCAGGATGGGAAAACTGACAACCATGCCTGCAGGTCTGATATATGCATCTGTAAGTGTACATGCAGCCAA
ACAAGAGGAATCCAAAAAGCAGCTAGTGAAACCAGAGCAGCTCCCCATATATACTGCACCACCGCTCCAGTCTAAATATG
TTGAAGAGCAGCCTGGTCATTTACAAATGGGCTTTGCTTCCATCCGCACTGCAACTGGTTGTTATATTGGCTGGTGCAAG
GGTGTTTATGTCTTTGTGAAAAATGGGATAATGGATACAGTACAATTTGGAAAAGATGCTTATGTCTATCTGAAGAATCC
TCCTCGAGATTTTCTTGCGAAAATGGGAGTTATTACAGTTTCAGGATTGGCGGGCTTGGTTTCAGCGAGAAAAGGTTCCA
AGTTTAAGAAAATTACTTATCCTCTGGGACTGGCCACTTTAGGAGCAACTGTTTGCTACCCAGTTCAGTCCGTAATAATT
GCTAAGGTAACAGCAAAAAAGGTATATGCTACAAGCCAGCAAATTTTTGGAGCAGTTAAATCATTGTGGACAAAAAGCAG
CAAAGAAGAGTCACTCCCTAAACCTAAAGAAAAAACTCAGCTAGGATCCTCTTCCGAAATAGAAGTACCTGCAAAAACAA
CTCACGTCTTGAAACACTCAGTGCCCTTGCCAACAGAATTCAGCTCTGAAGCAAAGACCAAATCAGAATCCACTTCAGGT
GCAACACAGTTTATGCCTGACCCCAAGCTCATGGATCACGGGCAGTCCCACCCAGAAGATATAGATATGTACAGCACTAG
AAGCTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 1 .95 RPM
SRP007412_cerebellum 2 .58 RPM
SRP007412_heart 8 .54 RPM
SRP007412_kidney 7 .17 RPM
SRP007412_liver 3 .96 RPM
SRP007412_testis 0 .95 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000000829 ortholog_one2one 1 retrogene
retro_amel_1035,
Canis familiaris ENSCAFG00000017383 ortholog_one2one 1 retrogene
retro_cfam_1490,
Callithrix jacchus ENSCJAG00000008249 ortholog_one2one 2 retrogenes
retro_cjac_1783, retro_cjac_2464,
Dipodomys ordii ENSDORG00000011045 ortholog_one2one 1 retrogene
retro_dord_373,
Equus caballus ENSECAG00000009229 ortholog_one2one 1 retrogene
retro_ecab_577,
Homo sapiens ENSG00000155008 ortholog_one2one 1 retrogene
retro_hsap_3253,
Gorilla gorilla ENSGGOG00000016329 ortholog_one2one 1 retrogene
retro_ggor_2213,
Loxodonta africana ENSLAFG00000008844 ortholog_one2one 1 retrogene
retro_lafr_1035,
Microcebus murinus ENSMICG00000015844 ortholog_one2one 1 retrogene
retro_mmur_1511,
Myotis lucifugus ENSMLUG00000011384 ortholog_one2one 1 retrogene
retro_mluc_1364,
Macaca mulatta ENSMMUG00000004335 ortholog_one2one 1 retrogene
retro_mmul_2045,
Mustela putorius furo ENSMPUG00000001899 possible_ortholog 3 retrogenes
retro_mputfur_606, retro_mputfur_734, retro_mputfur_874,
Nomascus leucogenys ENSNLEG00000002634 ortholog_one2one 1 retrogene
retro_nleu_1702,
Pongo abelii ENSPPYG00000020516 ortholog_one2one 1 retrogene
retro_pabe_2697,
Pan troglodytes ENSPTRG00000021742 within_species_paralog 5 retrogenes
retro_ptro_1147, retro_ptro_1799, retro_ptro_1992, retro_ptro_2205, retro_ptro_746,
Sus scrofa ENSSSCG00000012459 ortholog_one2many 1 retrogene
retro_sscr_610,
Tursiops truncatus ENSTTRG00000000429 ortholog_one2one 1 retrogene
retro_ttru_1337,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_2200 91.10 70.90
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Download FASTA sequences of all ENSPTRG00000022067 retrocopies