Parental gene:

MRPS18B, ENSMMUG00000006525

Aliases:None
Description:28S ribosomal protein S18b, mitochondrial [Source:RefSeq peptide;Acc:NP_001098635]
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:4:30196609..30204328(+)


>ENSMMUG00000006525
ATGGCGGCGTCCGTATTAAACACCCTGCTGAGGCGGCTTCCTATGCTTTCTCTCTTCCGAGGTGCCCACAGAGTTCAGGT
TCCCCTCCAGACTCTTTGCACCAAACCTCCCTCTGAGGAAGATTCTTTGTCCCCAGTTCCCATTTCTCCTTATAAGGATG
AACCCTGGAAATATCTGGAATCAGAAGAATACCAGGAGCGATATGGTTCTCGCCCTGTCTGGGCTGACTACCGCCGCAAC
CACAAGGGTGGTGTACCCCCACAGCGGACTCGGAAAACATGTATTCGTGGGAATAAAGTTGCTGGGAATCCCTGCCCCAT
CTGCCGAGATCACAAGTTGCATGTTGACTTTAGGAACGTGAAGCTCTTGGAACAGTTTGTCTGCGCCCACACGGGTATCA
TCTTCCATTCTCTATACACAGGAGTCTGTGTGAAGCAGCACAAGAGGTTGACCCAGGCCATCCAGAAAGCCAGGGATCAT
GGTCTCCTCATTTACCACATCCCCCAGGTTGAACCACGGGACCGTGACTTTAGTATCTCTCATGGGGCTGTGAGTGCTAC
TCCACCAGCCCCCACCCTGATCTCAGGTGACCCCTGGTACCCATGGTACAACTGGAAACAGCCACCAGAGAGAGAACTGT
CACGCCTTCGCCGGCTTTACCAGGGTCATCTCCGAGAAGAGAGTGGCCCCCCACCTGAGTCAATGCCCAAGATGCCCCCT
ACAGCACCAGTGGAAGCCTCCTTCACTGGGCAGACAGACCCTCAGAGTGCTCTGTAG

Library Parental gene expression (RPM)
SRP007412_brain 17 .82 RPM
SRP007412_brain_prefrontal_cortex 27 .37 RPM
SRP007412_cerebellum 18 .66 RPM
SRP007412_heart 24 .26 RPM
SRP007412_kidney 25 .94 RPM
SRP007412_liver 32 .97 RPM
SRP007412_testis 8 .82 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000005581 ortholog_one2one 1 retrogene
retro_chof_505,
Macropus eugenii ENSMEUG00000012457 ortholog_one2one 10 retrogenes
retro_meug_1183, retro_meug_2004, retro_meug_2124, retro_meug_215, retro_meug_610, retro_meug_648, retro_meug_696, retro_meug_712, retro_meug_717, retro_meug_734,
Monodelphis domestica ENSMODG00000015933 ortholog_one2one 1 retrogene
retro_mdom_426,
Mus musculus ENSMUSG00000024436 ortholog_one2one 1 retrogene
retro_mmus_2036,
Nomascus leucogenys ENSNLEG00000005224 ortholog_one2one 1 retrogene
retro_nleu_1811,
Oryctolagus cuniculus ENSOCUG00000002149 ortholog_one2one 2 retrogenes
retro_ocun_1307, retro_ocun_1641,
Pongo abelii ENSPPYG00000016412 ortholog_one2one 1 retrogene
retro_pabe_2050,
Pan troglodytes ENSPTRG00000017932 ortholog_one2one 1 retrogene
retro_ptro_1648,
Rattus norvegicus ENSRNOG00000000804 ortholog_one2one 1 retrogene
retro_rnor_1328,
Ictidomys tridecemlineatus ENSSTOG00000011853 ortholog_one2one 1 retrogene
retro_itri_254,
Tarsius syrichta ENSTSYG00000003333 ortholog_one2one 1 retrogene
retro_tsyr_1769,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_900 73.91 62.02
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Download FASTA sequences of all ENSMMUG00000006525 retrocopies