Parental gene:

Mrps18b, ENSMUSG00000024436

Aliases:Mrps18b, 2400002C15Rik
Description:mitochondrial ribosomal protein S18B [Source:MGI Symbol;Acc:MGI:1914223]
Organism:Mouse (Mus musculus)
Coordinates:17:35910378..35916389(-)


>ENSMUSG00000024436
ATGGCTGCCCCCTTGCGGCACACGCTTCTAAAGCTGGTTCCTACACTCTTACGAAGTTCCTATGTAGCTCAGGTTCCCCT
CCAGACTCTTTGCACCAGAGGCCCTCCTGAAGAAGATGCTCCATCCTCGCTTCCCGTTTCCCCATATGAGAGCGAGCCTT
GGAAGTACCTGGATTCAGAAGAATACCACAACCGCTATGGCTCTCGCCCTGTTTGGGCTGACTACCGCCGCAACCACAAA
GGTGGTGTGCCACCACAGCGGACCCGAAAGACATGTATTCGTAACAATAAAGTTGCTGGGAATCCTTGCCCAATCTGCCG
GGATCACAAGTTGCATGTTGACTTTAGGAATGTGAAGCTCTTGGAACAGTTTGTCTGTGCACACACGGGTATCATCTTTC
ACGCCCCATACACAGGGGTCTGTATGAAGCAGCACAAGAAGCTGACCCAGGCCATCCAGAAAGCCAGGGAGTGTGGTCTT
CTCAGTTACTACGTCCCCCAGGTTGAGCCCCGGGATGCTGACTTTGGTACTGTGCATGGAGCTGTCAGTGTGACTCCACC
AGCCCCCACACTGTTGTCAGGTGAACCTTGGTACCCATGGTACAGCTGGCAACAGCCACCAGAGAGAGAGCTGTCTCGCC
TTCGCCGACTCTATCAAGGAAATCTCCTAGAAGAAAGTGGCCCGCCACCTGAGTCGATGCCAGAGATGCCCACTACACCA
CCAGCAGAATCCTCCATTGAGCAGCCAGGCTCCCAGAGTGCTTAG

Library Parental gene expression (RPM)
SRP007412_brain 6 .38 RPM
SRP007412_cerebellum 4 .65 RPM
SRP007412_heart 8 .09 RPM
SRP007412_kidney 7 .89 RPM
SRP007412_liver 8 .60 RPM
SRP007412_testis 10 .93 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000005581 ortholog_one2one 1 retrogene
retro_chof_505,
Macropus eugenii ENSMEUG00000012457 ortholog_one2one 10 retrogenes
retro_meug_1183, retro_meug_2004, retro_meug_2124, retro_meug_215, retro_meug_610, retro_meug_648, retro_meug_696, retro_meug_712, retro_meug_717, retro_meug_734,
Macaca mulatta ENSMMUG00000006525 ortholog_one2one 1 retrogene
retro_mmul_900,
Monodelphis domestica ENSMODG00000015933 ortholog_one2one 1 retrogene
retro_mdom_426,
Nomascus leucogenys ENSNLEG00000005224 ortholog_one2one 1 retrogene
retro_nleu_1811,
Oryctolagus cuniculus ENSOCUG00000002149 ortholog_one2one 2 retrogenes
retro_ocun_1307, retro_ocun_1641,
Pongo abelii ENSPPYG00000016412 ortholog_one2one 1 retrogene
retro_pabe_2050,
Pan troglodytes ENSPTRG00000017932 ortholog_one2one 1 retrogene
retro_ptro_1648,
Rattus norvegicus ENSRNOG00000000804 ortholog_one2one 1 retrogene
retro_rnor_1328,
Ictidomys tridecemlineatus ENSSTOG00000011853 ortholog_one2one 1 retrogene
retro_itri_254,
Tarsius syrichta ENSTSYG00000003333 ortholog_one2one 1 retrogene
retro_tsyr_1769,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmus_2036 97.16 87.04
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Download FASTA sequences of all ENSMUSG00000024436 retrocopies