Parental gene: | GTF2F2, ENSMMUG00000012634 |
| Aliases: | None |
| Description: | general transcription factor IIF subunit 2 [Source:RefSeq peptide;Acc:NP_001253640] |
| Organism: | Rhesus macaque (Macaca mulatta) |
| Coordinates: | 17:24035460..24204800(+) |
>ENSMMUG00000012634
ATGGCCGAGCGCGGGGAACTCGACCTGACCGGCGCCAAACAGAACACAGGAGTGTGGCTAGTCAAGGTTCCCAAATATTT
GTCACAGCAATGGGCTAAAGCCCCTGGAAGAGGTGAAGTTGGGAAACTGCGGATTGCCAATAATGAACATGAGACATCCG
TGTCATTTACTTTGAATGAGGACCTTGCAAATATTCATGATATTGGTGGAAAACCGGCTTCAGTCAGTGCTCCTAGAGAA
CACCCATTTGTCTTGCAAAGTGTCGGAGGACAGACATTAACAGTGTTTACTGAGAGCTCATCAGATAAGCTGTCATTGGA
AGGAATAGTGGTACAAAGAGCTGAATGCCGACCAGCTGCCAGTGAAAACTACATGCGATTAAAAAGATTGCAAATAGAAG
AGTCTTCCAAACCTGTGAGGCTATCACAACAGCTGGAAAAAGTTGTAACAACCAATTACAAACCTGTTGCTAATCATCAA
TACAATATTGAATATGAAAGGAAAAAGAAAGAAGACGGAAAGCGAGCTCGAGCTGATAAACAACATGTTTTAGACATGCT
ATTTTCAGCCTTTGAGAAACATCAATACTATAATCTTAAGGACTTGGTGGACATCACAAAACAACCTGTGGTGTACCTGA
AGGAAATCTTAAAAGAAATTGGTGTTCAGAATGTAAAAGGGATCCACAAAAACACATGGGAGCTGAAGCCAGAGTACAGA
CACTATCAAGGAGAAGAAAAGAGTGACTGA
ATGGCCGAGCGCGGGGAACTCGACCTGACCGGCGCCAAACAGAACACAGGAGTGTGGCTAGTCAAGGTTCCCAAATATTT
GTCACAGCAATGGGCTAAAGCCCCTGGAAGAGGTGAAGTTGGGAAACTGCGGATTGCCAATAATGAACATGAGACATCCG
TGTCATTTACTTTGAATGAGGACCTTGCAAATATTCATGATATTGGTGGAAAACCGGCTTCAGTCAGTGCTCCTAGAGAA
CACCCATTTGTCTTGCAAAGTGTCGGAGGACAGACATTAACAGTGTTTACTGAGAGCTCATCAGATAAGCTGTCATTGGA
AGGAATAGTGGTACAAAGAGCTGAATGCCGACCAGCTGCCAGTGAAAACTACATGCGATTAAAAAGATTGCAAATAGAAG
AGTCTTCCAAACCTGTGAGGCTATCACAACAGCTGGAAAAAGTTGTAACAACCAATTACAAACCTGTTGCTAATCATCAA
TACAATATTGAATATGAAAGGAAAAAGAAAGAAGACGGAAAGCGAGCTCGAGCTGATAAACAACATGTTTTAGACATGCT
ATTTTCAGCCTTTGAGAAACATCAATACTATAATCTTAAGGACTTGGTGGACATCACAAAACAACCTGTGGTGTACCTGA
AGGAAATCTTAAAAGAAATTGGTGTTCAGAATGTAAAAGGGATCCACAAAAACACATGGGAGCTGAAGCCAGAGTACAGA
CACTATCAAGGAGAAGAAAAGAGTGACTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 6 .82 RPM |
| SRP007412_brain | 5 .83 RPM |
| SRP007412_cerebellum | 3 .36 RPM |
| SRP007412_heart | 4 .59 RPM |
| SRP007412_kidney | 6 .22 RPM |
| SRP007412_liver | 6 .25 RPM |
| SRP007412_testis | 10 .97 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Anolis carolinensis | ENSACAG00000028333 | ortholog_one2one | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000007391 | ortholog_one2one | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000019220 | ortholog_one2one | 2 retrogenes | |
| Homo sapiens | ENSG00000188342 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000006657 | ortholog_one2one | 2 retrogenes | |
| Myotis lucifugus | ENSMLUG00000010505 | possible_ortholog | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000025484 | ortholog_one2many | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000002097 | possible_ortholog | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000002106 | possible_ortholog | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000012517 | ortholog_one2one | 1 retrogene | |
| Procavia capensis | ENSPCAG00000005868 | ortholog_one2one | 3 retrogenes | |
| Pongo abelii | ENSPPYG00000005333 | ortholog_one2many | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000005840 | ortholog_one2one | 3 retrogenes | |
| Rattus norvegicus | ENSRNOG00000029316 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000006891 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmul_483 | 57.54 | 70.28 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmul_1913 | 75.65 | 91.57 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMMUG00000012634 retrocopies