Parental gene:

MMU.10922, ENSMMUG00000028767

Aliases:None
Description:eukaryotic translation initiation factor 3 subunit K [Source:RefSeq peptide;Acc:NP_001244620]
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:19:44956178..44973289(+)


>ENSMMUG00000028767
ATGGCGATGTTTGAACAGATGAGAGCTAACGTGGGCAAGTTGCTCAAGGGTATCGACAGGTACAATCCTGAGAACCTGGC
CACCCTGGAGCGCTATGTGGAGACGCAGGCCAAGGAAAATGCCTATGATCTGGAAGCCAACCTGGCTGTCCTGAAGCTGT
ACCAGTTCAACCCAGCCTTCTTTCAGACCACGGTCACCGCCCAGATCCTGCTGAAGGCCCTCACCAACCTGCCGCACACA
GATTTCACCCTATGCAAGTGCATGATCGACCAGGCACATCAAGAAGAAAGGCCAATCCGACAGATTTTGTACCTTGGGGA
CCTGCTGGAGACCTGCCACTTCCAGGCCTTCTGGCAAGCCCTGGATGAAAACATGGACCTCTTGGAAGGTATAACTGGCT
TTGAAGACTCTGTCCGAAAGTTTATCTGCCATGTTGTGGGTATCACTTACCAGCACATCGACCGCTGGCTGCTGGCCGAG
ATGCTCGGGGATCTGTCGGACAGCCAGCTAAAGGTGTGGATGAGCAAATACGGCTGGAGTGCTGACGAGTCGGGGCAGAT
CTTCATCTGTAGCCAAGAAGAGAGCATTAAACCCAAAAACATTGTGGAGAAGATTGACTTTGACAGTGTGTCCAGCATCA
TGGCCTCCTCCCAGTAA

Library Parental gene expression (RPM)
SRP007412_brain 14 .23 RPM
SRP007412_brain_prefrontal_cortex 34 .35 RPM
SRP007412_cerebellum 10 .59 RPM
SRP007412_heart 28 .62 RPM
SRP007412_kidney 15 .02 RPM
SRP007412_liver 24 .98 RPM
SRP007412_testis 18 .77 RPM



Species Parental gene accession Homology type Retrogenes number
Echinops telfairi ENSETEG00000007594 ortholog_one2many 3 retrogenes
retro_etel_1653, retro_etel_1868, retro_etel_5,
Homo sapiens ENSG00000178982 ortholog_one2one 2 retrogenes
retro_hsap_2616, retro_hsap_3224,
Gorilla gorilla ENSGGOG00000016808 ortholog_one2one 1 retrogene
retro_ggor_2192,
Myotis lucifugus ENSMLUG00000010217 ortholog_one2one 1 retrogene
retro_mluc_645,
Monodelphis domestica ENSMODG00000013314 ortholog_one2one 3 retrogenes
retro_mdom_1235, retro_mdom_1929, retro_mdom_781,
Otolemur garnettii ENSOGAG00000026260 ortholog_one2one 1 retrogene
retro_ogar_413,
Pongo abelii ENSPPYG00000025857 ortholog_one2one 4 retrogenes
retro_pabe_2342, retro_pabe_2555, retro_pabe_2610, retro_pabe_2673,
Pan troglodytes ENSPTRG00000010934 ortholog_one2one 2 retrogenes
retro_ptro_1763, retro_ptro_2176,
Sarcophilus harrisii ENSSHAG00000005313 ortholog_one2one 1 retrogene
retro_shar_689,
Tarsius syrichta ENSTSYG00000007001 ortholog_one2one 1 retrogene
retro_tsyr_1964,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_1478 74.07 61.93
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2. retro_mmul_2029 80.67 68.35
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Download FASTA sequences of all ENSMMUG00000028767 retrocopies