Parental gene: | EIF3K, ENSPTRG00000010934 |
| Aliases: | EIF3K, EIF3S12 |
| Description: | Eukaryotic translation initiation factor 3 subunit K [Source:UniProtKB/TrEMBL;Acc:H2QG88] |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 19:43829079..43846373(+) |
>ENSPTRG00000010934
ATGGCGATGTTTGAGCAGATGAGAGCCAACGTGGGCAAGTTGCTCAAGGGTATCGACAGGTACAATCCTGAGAACCTGGC
CACCCTGGAGCGCTATGTAGAGACGCAGGCCAAGGAAAATGCCTATGATCTGGAAGCCAACCTGGCTGTCCTGAAGCTGT
ACCAGTTCAACCCAGCCTTCTTTCAGACCACGGTCACTGCCCAGATCCTGCTGAAGGCCCTCACCAACTTGCCGCACACA
GACTTCACCCTGTGCAAGTGCATGATCGACCAGGCACATCAAGAAGAACGGCCAATCCGACAGATTTTGTACCTCGGGGA
CCTGCTGGAGACCTGCCATTTCCAGGCCTTCTGGCAAGCCCTGGATGAAAACATGGACCTCTTGGAAGGTATAACTGGCT
TTGAAGACTCTGTCCGAAAGTTTATCTGCCATGTTGTGGGTATCACTTACCAGCACATTGACCGCTGGCTGCTGGCCGAG
ATGCTCGGGGATCTGTCGGACAGCCAGCTAAAGGTGTGGATGAGCAAATACGGCTGGAGTGCCGACGAGTCGGGGCAGAT
CTTCATCTGTAGCCAAGAAGAGAGCATTAAACCCAAGAACATTGTGGAGAAGATTGACTTTGACAGTGTGTCCAGCATCA
TGGCCTCCTCCCAGTAA
ATGGCGATGTTTGAGCAGATGAGAGCCAACGTGGGCAAGTTGCTCAAGGGTATCGACAGGTACAATCCTGAGAACCTGGC
CACCCTGGAGCGCTATGTAGAGACGCAGGCCAAGGAAAATGCCTATGATCTGGAAGCCAACCTGGCTGTCCTGAAGCTGT
ACCAGTTCAACCCAGCCTTCTTTCAGACCACGGTCACTGCCCAGATCCTGCTGAAGGCCCTCACCAACTTGCCGCACACA
GACTTCACCCTGTGCAAGTGCATGATCGACCAGGCACATCAAGAAGAACGGCCAATCCGACAGATTTTGTACCTCGGGGA
CCTGCTGGAGACCTGCCATTTCCAGGCCTTCTGGCAAGCCCTGGATGAAAACATGGACCTCTTGGAAGGTATAACTGGCT
TTGAAGACTCTGTCCGAAAGTTTATCTGCCATGTTGTGGGTATCACTTACCAGCACATTGACCGCTGGCTGCTGGCCGAG
ATGCTCGGGGATCTGTCGGACAGCCAGCTAAAGGTGTGGATGAGCAAATACGGCTGGAGTGCCGACGAGTCGGGGCAGAT
CTTCATCTGTAGCCAAGAAGAGAGCATTAAACCCAAGAACATTGTGGAGAAGATTGACTTTGACAGTGTGTCCAGCATCA
TGGCCTCCTCCCAGTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 76 .43 RPM |
| SRP007412_cerebellum | 52 .70 RPM |
| SRP007412_heart | 40 .43 RPM |
| SRP007412_kidney | 105 .10 RPM |
| SRP007412_liver | 58 .95 RPM |
| SRP007412_testis | 30 .46 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Echinops telfairi | ENSETEG00000007594 | ortholog_one2many | 3 retrogenes | |
| Homo sapiens | ENSG00000178982 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000016808 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000010217 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000028767 | ortholog_one2one | 2 retrogenes | |
| Monodelphis domestica | ENSMODG00000013314 | ortholog_one2one | 3 retrogenes | |
| Otolemur garnettii | ENSOGAG00000026260 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000025857 | ortholog_one2one | 4 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000005313 | ortholog_one2one | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000007001 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_1763 | 75.56 | 61.93 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ptro_2176 | 80.37 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000010934 retrocopies