Parental gene: | EIF3K, ENSPPYG00000025857 |
| Aliases: | None |
| Description: | eukaryotic translation initiation factor 3, subunit K [Source:HGNC Symbol;Acc:24656] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 19:39487280..39504154(+) |
>ENSPPYG00000025857
ATGGCGATGTTTGAGCAGATGAGAGCCAACGTGGGCAAGTTGCTCAAGGGTATCGACAGGTACAATCCTGAGAACCTGGC
CACCCTGGAGCGCTATGTAGAGACGCAGGCCAAGGAAAATGCCTATGATCTGGAAGCCAACCTGGCTGTCCTGAAGCTGT
ACCAGTTCAACCCAGCCTTCTTTCAGACCACGGTCACCGCCCAGATCCTGCTGAAGGCCCTCACCAACCTGCCGCACACA
GACTTCACCCTGTGCAAGTGCATGATCGACCAGGCACATCAAGAAGAACGGCCAATCCGACAGATTTTGTACCTTGGGGA
CCTGCTGGAGACCTGCCACTTCCAGGCCTTCTGGCAAGCCCTGGATGAAAACATGGACCTCTTGGAAGGTATAACTGGCT
TTGAAGACTCTGTCCGAAAGTTTATCTGCCATGTGGTGGGTATCACTTACCAGCACATCGACCGCTGGCTGCTGGCCGAG
ATGCTCGGGGATCTGTCAGGTGTGTCCAGCATCATGGCCTCCTCCCAGTAA
ATGGCGATGTTTGAGCAGATGAGAGCCAACGTGGGCAAGTTGCTCAAGGGTATCGACAGGTACAATCCTGAGAACCTGGC
CACCCTGGAGCGCTATGTAGAGACGCAGGCCAAGGAAAATGCCTATGATCTGGAAGCCAACCTGGCTGTCCTGAAGCTGT
ACCAGTTCAACCCAGCCTTCTTTCAGACCACGGTCACCGCCCAGATCCTGCTGAAGGCCCTCACCAACCTGCCGCACACA
GACTTCACCCTGTGCAAGTGCATGATCGACCAGGCACATCAAGAAGAACGGCCAATCCGACAGATTTTGTACCTTGGGGA
CCTGCTGGAGACCTGCCACTTCCAGGCCTTCTGGCAAGCCCTGGATGAAAACATGGACCTCTTGGAAGGTATAACTGGCT
TTGAAGACTCTGTCCGAAAGTTTATCTGCCATGTGGTGGGTATCACTTACCAGCACATCGACCGCTGGCTGCTGGCCGAG
ATGCTCGGGGATCTGTCAGGTGTGTCCAGCATCATGGCCTCCTCCCAGTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 1 .55 RPM |
| SRP007412_cerebellum | 2 .19 RPM |
| SRP007412_heart | 1 .32 RPM |
| SRP007412_kidney | 2 .19 RPM |
| SRP007412_liver | 1 .35 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Echinops telfairi | ENSETEG00000007594 | ortholog_one2many | 3 retrogenes | |
| Homo sapiens | ENSG00000178982 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000016808 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000010217 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000028767 | ortholog_one2one | 2 retrogenes | |
| Monodelphis domestica | ENSMODG00000013314 | ortholog_one2one | 3 retrogenes | |
| Otolemur garnettii | ENSOGAG00000026260 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000010934 | ortholog_one2one | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000020495 | ortholog_one2one | 3 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000005313 | ortholog_one2one | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000007001 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_2342 | 74.26 | 76.70 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pabe_2555 | 82.29 | 53.41 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_pabe_2610 | 83.33 | 53.41 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_pabe_2673 | 80.72 | 93.75 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000025857 retrocopies