Parental gene: | ENSMODG00000010312 |
| Aliases: | None |
| Description: | None |
| Organism: | Opossum (Monodelphis domestica) |
| Coordinates: | 3:509934908..509950129(-) |
>ENSMODG00000010312
ATGGATGATAGCAACCATGATCCCCAGTTTGAGCCCATTGTCTCTCTGCCTGAGCAGGAGATTAAGACCCTGGAGGAAGA
TGAAGAAGAGCTCTTTAAGATGCGAGCAAAGCTGTTCCGATTTGCATCTGAGAATGACCTTCCAGAGTGGAAAGAGCGAG
GGACAGGTGATGTGAAGCTACTGAAACACAAGGAGAAAGGGACGATTCGCCTCCTCATGAGGCGGGACAAGACTCTGAAG
ATCTGTGCGAATCACTATATAACCCCCCTGATGGAGCTGAAGCCCAATGCAGGCAGTGACAGGGCTTGGGTTTGGAACAC
ACATGCTGACTTTGCCGATGAAAGTCCAAAGCCAGAGCTGCTGGCCATCCGATTCCTGAATGCAGAAAATGCCCAGAAGT
TTAAGGCAAAATTCGAAGAATGCAAGAAGGAGCTAAAAAACCAAGAAAATAAAGTAAAAAATGAAGAACCAAAAATAGAA
CCAAAAGAAGAATCTGTAGAACCGAAAGAAGAACCAAAAGAAGAATCGAAAGAAGAGAAAGGTCAAGCTACTAAACTGCT
TCTTCAATGTGGCACACTCCTCCCCTGA
ATGGATGATAGCAACCATGATCCCCAGTTTGAGCCCATTGTCTCTCTGCCTGAGCAGGAGATTAAGACCCTGGAGGAAGA
TGAAGAAGAGCTCTTTAAGATGCGAGCAAAGCTGTTCCGATTTGCATCTGAGAATGACCTTCCAGAGTGGAAAGAGCGAG
GGACAGGTGATGTGAAGCTACTGAAACACAAGGAGAAAGGGACGATTCGCCTCCTCATGAGGCGGGACAAGACTCTGAAG
ATCTGTGCGAATCACTATATAACCCCCCTGATGGAGCTGAAGCCCAATGCAGGCAGTGACAGGGCTTGGGTTTGGAACAC
ACATGCTGACTTTGCCGATGAAAGTCCAAAGCCAGAGCTGCTGGCCATCCGATTCCTGAATGCAGAAAATGCCCAGAAGT
TTAAGGCAAAATTCGAAGAATGCAAGAAGGAGCTAAAAAACCAAGAAAATAAAGTAAAAAATGAAGAACCAAAAATAGAA
CCAAAAGAAGAATCTGTAGAACCGAAAGAAGAACCAAAAGAAGAATCGAAAGAAGAGAAAGGTCAAGCTACTAAACTGCT
TCTTCAATGTGGCACACTCCTCCCCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 0 .00 RPM |
| SRP007412_cerebellum | 0 .00 RPM |
| SRP007412_heart | 0 .00 RPM |
| SRP007412_kidney | 0 .00 RPM |
| SRP007412_liver | 0 .00 RPM |
| SRP007412_testis | 0 .00 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Callithrix jacchus | ENSCJAG00000010749 | ortholog_many2many | 1 retrogene | |
| Cavia porcellus | ENSCPOG00000002962 | ortholog_many2many | 1 retrogene | |
| Dipodomys ordii | ENSDORG00000011317 | ortholog_one2many | 2 retrogenes | |
| Echinops telfairi | ENSETEG00000015996 | ortholog_one2many | 2 retrogenes | |
| Homo sapiens | ENSG00000099901 | ortholog_one2many | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000000784 | ortholog_many2many | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000016620 | ortholog_one2many | 8 retrogenes | |
| Myotis lucifugus | ENSMLUG00000017535 | ortholog_one2many | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000020100 | ortholog_one2many | 1 retrogene | |
| Mus musculus | ENSMUSG00000005732 | ortholog_one2many | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000005684 | ortholog_one2many | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000034333 | ortholog_one2many | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000011593 | ortholog_one2many | 4 retrogenes | |
| Rattus norvegicus | ENSRNOG00000001884 | ortholog_one2many | 4 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000006873 | ortholog_many2many | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000026840 | ortholog_many2many | 2 retrogenes | |
| Tarsius syrichta | ENSTSYG00000013573 | ortholog_one2many | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000008142 | ortholog_one2many | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mdom_288 | 91.43 | 71.79 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mdom_1290 | 92.59 | 69.23 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_mdom_1397 | 85.71 | 70.77 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_mdom_1406 | 88.41 | 70.26 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_mdom_1996 | 60.66 | 61.54 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMODG00000010312 retrocopies