Parental gene: | HNRNPK, ENSNLEG00000003486 |
| Aliases: | None |
| Description: | None |
| Organism: | Gibbon (Nomascus leucogenys) |
| Coordinates: | GL397309.1:15475498..15489358(-) |
>ENSNLEG00000003486
ATGGAAACTGAACAGCCAGAAGAAACCTTCCCTAACACTGAAACCAATGGTGAATTTGGTAAACGCCCTGCAGAAGATAT
GGAAGAGGAACAAGCATTTAAAAGATCTAGAAACACTGATGAGATGGTTGAATTACGCATTCTGCTTCAGAGCAAGAATG
CTGGGGCAGTGATTGGAAAAGGAGGCAAGAATATTAAGGCTCTCCGTACAGACTACAATGCCAGTGTTTCAGTCCCAGAC
AGCAGTGGCCCCGAGCGCATATTGAGTATCAGTGCTGATATTGAAACAATTGGAGAAATTCTGAAGAAAATCATCCCTAC
CTTGGAAGAGGGCCTGCAGTTGCCATCACCCACTGCAACCAGCCAGCTCCCGCTCGAATCTGATGCTGTGGAATGCTTAA
ATTACCAACACTATAAAGGAAGTGACTTTGACTGCGAGTTGAGGCTGTTGATTCATCAGAGTCTAGCAGGAGGAATTATT
GGGGTCAAAGGTGCTAAAATCAAAGAACTTCGAGAGAACACTCAAACCACCATCAAGCTTTTCCAGGAATGCTGTCCTCA
TTCCACTGACAGAGTTGTTCTTATTGGAGGAAAACCCGATAGGGTTGTAGAGTGCATAAAGATCATCCTTGATCTTATAT
CTGAGTCTCCCATCAAAGGACGTGCACAGCCTTATGATCCCAATTTTTACGATGAAACCTATGATTATGGTGGTTTTACA
ATGATGTTTGATGACCGCCGTGGACGTCCAGTGGGATTTCCCATGCGGGGAAGAGGTGGTTTTGACAGAATGCCTCCTGG
TCGGGGTGGGCGTCCCATGCCTCCATCTAGAAGAGATTATGATGATATGAGCCCTCGTCGAGGACCACCTCCCCCTCCTC
CCGGACGAGGCGGCCGGGGTGGTAGCAGAGCTCGGAATCTTCCTCTTCCTCCACCACCACCACCTAGAGGGGGAGACCTC
ATGGCCTATGACAGAAGAGGGAGACCTGGAGACCGTTACGACGGAATGGTTGGTTTCAGTGCTGATGAAACTTGGGACTC
TGCAATAGATACATGGAGCCCATCAGAATGGCAGATGGCTTATGAACCACAGGTTGAGTATCATACAGATTATTCCTATG
CAGGGGGTCGTGGCTCATATGGTGATCTTGGTGGACCTATTATTACTACACAAGTAACTATTCCCAAAGATTTGGCTGGA
TCTATTATTGGCAAAGGTGGTCAGCGGATTAAACAAATCCGTCATGAGTCGGGAGCTTCGATCAAAATTGATGAACCTTT
AGAAGGATCCGAAGATCGGATCATTACCATTACAGGAACACAGGACCAGATACAGAATGCACAGTATTTGCTGCAGAACA
GTGTGAAGCAGTATGCAGATGTTGAAGGATTCTAA
ATGGAAACTGAACAGCCAGAAGAAACCTTCCCTAACACTGAAACCAATGGTGAATTTGGTAAACGCCCTGCAGAAGATAT
GGAAGAGGAACAAGCATTTAAAAGATCTAGAAACACTGATGAGATGGTTGAATTACGCATTCTGCTTCAGAGCAAGAATG
CTGGGGCAGTGATTGGAAAAGGAGGCAAGAATATTAAGGCTCTCCGTACAGACTACAATGCCAGTGTTTCAGTCCCAGAC
AGCAGTGGCCCCGAGCGCATATTGAGTATCAGTGCTGATATTGAAACAATTGGAGAAATTCTGAAGAAAATCATCCCTAC
CTTGGAAGAGGGCCTGCAGTTGCCATCACCCACTGCAACCAGCCAGCTCCCGCTCGAATCTGATGCTGTGGAATGCTTAA
ATTACCAACACTATAAAGGAAGTGACTTTGACTGCGAGTTGAGGCTGTTGATTCATCAGAGTCTAGCAGGAGGAATTATT
GGGGTCAAAGGTGCTAAAATCAAAGAACTTCGAGAGAACACTCAAACCACCATCAAGCTTTTCCAGGAATGCTGTCCTCA
TTCCACTGACAGAGTTGTTCTTATTGGAGGAAAACCCGATAGGGTTGTAGAGTGCATAAAGATCATCCTTGATCTTATAT
CTGAGTCTCCCATCAAAGGACGTGCACAGCCTTATGATCCCAATTTTTACGATGAAACCTATGATTATGGTGGTTTTACA
ATGATGTTTGATGACCGCCGTGGACGTCCAGTGGGATTTCCCATGCGGGGAAGAGGTGGTTTTGACAGAATGCCTCCTGG
TCGGGGTGGGCGTCCCATGCCTCCATCTAGAAGAGATTATGATGATATGAGCCCTCGTCGAGGACCACCTCCCCCTCCTC
CCGGACGAGGCGGCCGGGGTGGTAGCAGAGCTCGGAATCTTCCTCTTCCTCCACCACCACCACCTAGAGGGGGAGACCTC
ATGGCCTATGACAGAAGAGGGAGACCTGGAGACCGTTACGACGGAATGGTTGGTTTCAGTGCTGATGAAACTTGGGACTC
TGCAATAGATACATGGAGCCCATCAGAATGGCAGATGGCTTATGAACCACAGGTTGAGTATCATACAGATTATTCCTATG
CAGGGGGTCGTGGCTCATATGGTGATCTTGGTGGACCTATTATTACTACACAAGTAACTATTCCCAAAGATTTGGCTGGA
TCTATTATTGGCAAAGGTGGTCAGCGGATTAAACAAATCCGTCATGAGTCGGGAGCTTCGATCAAAATTGATGAACCTTT
AGAAGGATCCGAAGATCGGATCATTACCATTACAGGAACACAGGACCAGATACAGAATGCACAGTATTTGCTGCAGAACA
GTGTGAAGCAGTATGCAGATGTTGAAGGATTCTAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Dasypus novemcinctus | ENSDNOG00000000026 | ortholog_one2one | 4 retrogenes | |
| Dipodomys ordii | ENSDORG00000016024 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000015500 | possible_ortholog | 2 retrogenes | |
| Loxodonta africana | ENSLAFG00000026567 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000018871 | possible_ortholog | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000008402 | possible_ortholog | 1 retrogene | |
| Mus musculus | ENSMUSG00000021546 | possible_ortholog | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000002639 | other_paralog | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000017693 | other_paralog | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000007478 | possible_ortholog | 3 retrogenes | |
| Pongo abelii | ENSPPYG00000019327 | possible_ortholog | 3 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000017109 | possible_ortholog | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000001196 | ortholog_one2one | 3 retrogenes | |
| Tursiops truncatus | ENSTTRG00000004906 | possible_ortholog | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000016693 | possible_ortholog | 7 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_nleu_973 | 85.68 | 98.92 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_nleu_1178 | 90.34 | 62.50 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_nleu_1815 | 82.81 | 82.54 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSNLEG00000003486 retrocopies