RetrogeneDB ID: | retro_ttru_1144 | ||
Retrocopylocation | Organism: | Dolphin (Tursiops truncatus) | |
Coordinates: | scaffold_105560:28086..29439(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSTTRG00000016693 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 89.89 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 2 |
Parental | METEQPEETFPNTETNGEFGKRPAEDM-EEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALR |
METEQPEET.PNTET.G.F.KRPA.D..EEEQ.FKRSRNTDEMVEL.ILLQSKNAGAVIGKG.KNIKALR | |
Retrocopy | METEQPEETLPNTETSGGFDKRPAKDT<EEEQVFKRSRNTDEMVELLILLQSKNAGAVIGKGSKNIKALR |
Parental | TDYNASVSVPDSSGPERILSISADIETIGEILKKIIPTLEXGLQLPSPTATSQLPLESDAVECLNYQHYK |
TDYNASVS.PDSSGPERIL..SA.IETIGEILKKIIPTLE.GLQLPSPTATSQLPLESDAVECLNYQH.K | |
Retrocopy | TDYNASVSAPDSSGPERILN-SANIETIGEILKKIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHCK |
Parental | GSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPQSTDRVVLIGGKPDRVVECIKII |
GSDFDCELRLLIHQSLAGGIIGVKGAKIKELRE.TQTTIKLFQE.CPQ.TDR.VLIGGKPDRVVECIKII | |
Retrocopy | GSDFDCELRLLIHQSLAGGIIGVKGAKIKELRETTQTTIKLFQERCPQPTDRFVLIGGKPDRVVECIKII |
Parental | LDLISESPIKGRAQPYDPNFYDETYDYGGFTMMFDDRRGRPVGFPMRGRGGFDRMPPGRGGRPMPPSRRD |
LDLISESPIKG.AQPYDP.FYDE.YDYGGFTMM.DDR.GRP.GFPMRGRGGFDRMPPGR.GRPMPPSRRD | |
Retrocopy | LDLISESPIKGHAQPYDPKFYDEIYDYGGFTMMVDDRCGRPMGFPMRGRGGFDRMPPGRPGRPMPPSRRD |
Parental | YDDMSPRR-GPPPPPPGRGGRGGSRARNLPLPPPPPPRGGDLMAYDRRGRPGDRYDGMVGFSADETWDSA |
.DD.S..R..PP.PPPGRGG.GG.RARNLPLPPPPPPRGGDLMAYDRRGRPGDRYDGMVGFSADETWDSA | |
Retrocopy | CDDRSLSR>PPP-PPPGRGGLGGGRARNLPLPPPPPPRGGDLMAYDRRGRPGDRYDGMVGFSADETWDSA |
Parental | IDTWSPSEWQMAYEPQGGSGYDYSYAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESG |
ID.WSPSEWQMAYEPQG.SG.DYSYAGGRGSYGDLG.PIITTQVTIPKDLAGSIIGKGGQ..KQIRHESG | |
Retrocopy | IDAWSPSEWQMAYEPQGSSGCDYSYAGGRGSYGDLGRPIITTQVTIPKDLAGSIIGKGGQQMKQIRHESG |
Parental | ASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQN |
ASIKIDEPLEGSED..IT.TGTQDQI.NAQYLLQN | |
Retrocopy | ASIKIDEPLEGSEDQVITVTGTQDQIRNAQYLLQN |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |