Parental gene: | ENSTTRG00000016693 |
| Aliases: | None |
| Description: | None |
| Organism: | Dolphin (Tursiops truncatus) |
| Coordinates: | GeneScaffold_2419:255107..262914(-) |
>ENSTTRG00000016693
ATGGAAACTGAACAGCCAGAGGAAACCTTTCCCAACACCGAAACCAATGGTGAATTTGGTAAACGCCCTGCTGAAGATAT
GGAAGAGGAACAAGCTTTTAAAAGATCTAGAAACACTGATGAGATGGTTGAATTACGCATTCTGCTTCAGAGCAAGAATG
CTGGGGCAGTGATTGGAAAAGGAGGCAAGAATATTAAGGCTCTCCGTACAGACTACAATGCCAGTGTTTCAGTCCCAGAC
AGCAGTGGCCCCGAGCGCATATTGAGTATCAGTGCTGATATTGAAACAATTGGAGAAATTCTGAAGAAAATCATCCCTAC
CTTGGAAGANGGCCTGCAGTTGCCATCACCCACTGCAACCAGCCAGCTCCCGCTCGAATCTGATGCTGTGGAATGCTTAA
ATTACCAACACTATAAAGGAAGCGACTTTGACTGCGAGTTGAGACTGTTGATTCATCAGAGTCTGGCAGGAGGAATTATT
GGGGTCAAAGGTGCTAAAATCAAAGAACTTCGAGAGAACACTCAGACAACAATCAAGCTTTTCCAGGAATGTTGTCCTCA
ATCCACTGACAGAGTCGTTCTTATTGGAGGAAAACCTGATAGGGTTGTAGAGTGCATAAAGATCATCCTTGATCTTATAT
CAGAGTCTCCCATTAAAGGACGTGCTCAGCCTTATGATCCCAACTTTTACGATGAAACCTATGATTATGGTGGTTTTACA
ATGATGTTTGATGACCGCCGTGGACGTCCTGTGGGATTTCCCATGCGGGGAAGAGGTGGTTTTGACAGAATGCCTCCTGG
TCGGGGTGGGCGTCCCATGCCTCCATCCAGAAGAGATTATGATGATATGAGCCCTCGTCGAGGACCTCCTCCACCTCCTC
CTGGACGAGGTGGCCGGGGTGGTAGCAGAGCTCGGAATCTTCCTCTTCCTCCACCACCACCACCTAGAGGGGGAGATCTA
ATGGCCTATGACAGAAGAGGAAGACCTGGAGACCGTTATGATGGCATGGTTGGTTTCAGTGCTGATGAAACCTGGGACTC
TGCAATAGATACATGGAGCCCATCAGAGTGGCAGATGGCTTATGAACCACAGGGTGGCTCTGGATATGATTATTCCTATG
CAGGGGGTCGTGGCTCATATGGTGATCTTGGTGGACCTATTATTACTACACAAGTAACTATTCCCAAAGATTTGGCTGGA
TCTATTATTGGCAAAGGTGGTCAGCGGATTAAACAAATCCGTCATGAGTCAGGAGCGTCGATCAAAATTGATGAGCCTTT
AGAAGGGTCCGAAGACCGGATCATTACCATTACAGGAACACAGGACCAGATACAAAATGCACAGTACTTGCTGCAGAAC
ATGGAAACTGAACAGCCAGAGGAAACCTTTCCCAACACCGAAACCAATGGTGAATTTGGTAAACGCCCTGCTGAAGATAT
GGAAGAGGAACAAGCTTTTAAAAGATCTAGAAACACTGATGAGATGGTTGAATTACGCATTCTGCTTCAGAGCAAGAATG
CTGGGGCAGTGATTGGAAAAGGAGGCAAGAATATTAAGGCTCTCCGTACAGACTACAATGCCAGTGTTTCAGTCCCAGAC
AGCAGTGGCCCCGAGCGCATATTGAGTATCAGTGCTGATATTGAAACAATTGGAGAAATTCTGAAGAAAATCATCCCTAC
CTTGGAAGANGGCCTGCAGTTGCCATCACCCACTGCAACCAGCCAGCTCCCGCTCGAATCTGATGCTGTGGAATGCTTAA
ATTACCAACACTATAAAGGAAGCGACTTTGACTGCGAGTTGAGACTGTTGATTCATCAGAGTCTGGCAGGAGGAATTATT
GGGGTCAAAGGTGCTAAAATCAAAGAACTTCGAGAGAACACTCAGACAACAATCAAGCTTTTCCAGGAATGTTGTCCTCA
ATCCACTGACAGAGTCGTTCTTATTGGAGGAAAACCTGATAGGGTTGTAGAGTGCATAAAGATCATCCTTGATCTTATAT
CAGAGTCTCCCATTAAAGGACGTGCTCAGCCTTATGATCCCAACTTTTACGATGAAACCTATGATTATGGTGGTTTTACA
ATGATGTTTGATGACCGCCGTGGACGTCCTGTGGGATTTCCCATGCGGGGAAGAGGTGGTTTTGACAGAATGCCTCCTGG
TCGGGGTGGGCGTCCCATGCCTCCATCCAGAAGAGATTATGATGATATGAGCCCTCGTCGAGGACCTCCTCCACCTCCTC
CTGGACGAGGTGGCCGGGGTGGTAGCAGAGCTCGGAATCTTCCTCTTCCTCCACCACCACCACCTAGAGGGGGAGATCTA
ATGGCCTATGACAGAAGAGGAAGACCTGGAGACCGTTATGATGGCATGGTTGGTTTCAGTGCTGATGAAACCTGGGACTC
TGCAATAGATACATGGAGCCCATCAGAGTGGCAGATGGCTTATGAACCACAGGGTGGCTCTGGATATGATTATTCCTATG
CAGGGGGTCGTGGCTCATATGGTGATCTTGGTGGACCTATTATTACTACACAAGTAACTATTCCCAAAGATTTGGCTGGA
TCTATTATTGGCAAAGGTGGTCAGCGGATTAAACAAATCCGTCATGAGTCAGGAGCGTCGATCAAAATTGATGAGCCTTT
AGAAGGGTCCGAAGACCGGATCATTACCATTACAGGAACACAGGACCAGATACAAAATGCACAGTACTTGCTGCAGAAC
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000021131 | ortholog_one2many | 2 retrogenes | |
| Choloepus hoffmanni | ENSCHOG00000010832 | possible_ortholog | 2 retrogenes | |
| Dasypus novemcinctus | ENSDNOG00000000026 | possible_ortholog | 4 retrogenes | |
| Dipodomys ordii | ENSDORG00000016024 | possible_ortholog | 1 retrogene | |
| Homo sapiens | ENSG00000165119 | ortholog_one2many | 3 retrogenes | |
| Gorilla gorilla | ENSGGOG00000015500 | possible_ortholog | 2 retrogenes | |
| Loxodonta africana | ENSLAFG00000026567 | possible_ortholog | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000006975 | possible_ortholog | 3 retrogenes | |
| Microcebus murinus | ENSMICG00000015780 | ortholog_one2many | 3 retrogenes | |
| Myotis lucifugus | ENSMLUG00000005871 | ortholog_one2many | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000018871 | possible_ortholog | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000008402 | possible_ortholog | 1 retrogene | |
| Mus musculus | ENSMUSG00000021546 | ortholog_one2many | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000003486 | possible_ortholog | 3 retrogenes | |
| Otolemur garnettii | ENSOGAG00000007478 | possible_ortholog | 3 retrogenes | |
| Pongo abelii | ENSPPYG00000019327 | ortholog_one2many | 3 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000017109 | possible_ortholog | 1 retrogene | |
| Sus scrofa | ENSSSCG00000022760 | possible_ortholog | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000001289 | ortholog_one2many | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000001196 | possible_ortholog | 3 retrogenes | |
| Tursiops truncatus | ENSTTRG00000004906 | within_species_paralog | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000015075 | other_paralog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ttru_180 | 88.45 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ttru_444 | 84.81 | 79.47 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_ttru_813 | 91.70 | 58.50 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_ttru_930 | 90.33 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_ttru_937 | 89.32 | 96.91 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_ttru_1144 | 89.89 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_ttru_1922 | 87.38 | 68.21 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSTTRG00000016693 retrocopies