Parental gene:

HNRNPK, ENSPPYG00000019327

Aliases:HNRNPK, HNRPK
Description:Heterogeneous nuclear ribonucleoprotein K [Source:UniProtKB/Swiss-Prot;Acc:Q5R5H8]
Organism:Orangutan (Pongo abelii)
Coordinates:9:79133096..79146989(-)


>ENSPPYG00000019327
ATGGAAACTGAACAGCCAGAAGAAACCTTCCCTAACACTGAAACCAATGGTGAATTTGGTAAACGCCCTGCAGAAGATAT
GGAAGAGGAACAAGCATTTAAAAGATCTAGAAACACTGATGAGATGGTTGAATTACGCATTCTGCTTCAGAGCAAGAATG
CTGGGGCAGTGATTGGAAAAGGAGGCAAGAATATTAAGGCTCTCCGTACAGACTACAATGCCAGTGTTTCAGTCCCAGAC
AGCAGTGGCCCCGAGCGCATATTGAGTATCAGTGCTGATATTGAAACAATTGGAGAAATTCTGAAGAAAATCATCCCTAC
CTTGGAAGAGGGCCTGCAGTTGCCATCACCCACTGCAACCAGCCAGCTCCCGCTCGAATCTGATGCTGTGGAATGCTTAA
ATTACCAACACTATAAAGGAAGTGACTTTGACTGCGAGTTGAGGCTGTTGATTCATCAGAGTCTAGCAGGAGGAATTATT
GGGGTCAAAGGTGCTAAAATCAAAGAACTTCGAGAGAACACTCAAACCACCATCAAGCTTTTCCAGGAATGCTGTCCTCA
TTCCACTGACAGAGTTGTTCTTATTGGAGGAAAACCCGATAGGGTTGTAGAGTGCATAAAGATCATCCTTGATCTTATAT
CTGAGTCTCCCATCAAAGGACGTGCACAGCCTTACGATCCCAATTTTTACGATGAAACCTATGATTATGGTGGTTTTACA
ATGATGTTTGATGACCGCCGTGGACGCCCAGTGGGATTTCCAATGCGGGGAAGAGGTGGTTTTGACAGAATGCCTCCTGG
TCGGGGTGGGCGTCCCATGCCTCCATCTAGAAGAGATTATGATGATATGAGCCCTCGTCGAGGACCACCTCCCCCTCCTC
CTGGACGAGGCGGCCGGGGTGGTAGCAGAGCTCGGAATCTTCCTCTTCCTCCACCACCACCACCTAGAGGGGGAGACCTC
ATGGCCTATGACAGAAGAGGGAGACCTGGAGACCGTTACGATGGCATGGTTGGTTTCAGTGCTGATGAAACTTGGGACTC
TGCAATAGATACATGGAGCCCATCAGAATGGCAGATGGCTTATGAACCACAGGGTGGCTCTGGATATGATTATTCCTATG
CAGGGGGTCGTGGCTCATATGGTGATCTTGGTGGACCTATTATTACTACACAAGTAACTATTCCCAAAGATTTGGCTGGA
TCTATTATTGGCAAAGGTGGTCAGCGGATTAAACAAATCCGTCATGAGTCGGGAGCTTCGATCAAAATTGATGAGCCTTT
AGAAGGATCCGAAGATCGGATCATTACCATTACAGGAACACAGGACCAGATACAGAATGCACAGTATTTGCTGCAGAACA
GTGTGAAGCAGTATGCAGATGTTGAAGGATTCTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 279 .55 RPM
SRP007412_cerebellum 257 .55 RPM
SRP007412_heart 133 .15 RPM
SRP007412_kidney 269 .95 RPM
SRP007412_liver 212 .77 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000021131 ortholog_one2one 2 retrogenes
retro_btau_468, retro_btau_605,
Dasypus novemcinctus ENSDNOG00000000026 possible_ortholog 4 retrogenes
retro_dnov_1433, retro_dnov_1820, retro_dnov_2316, retro_dnov_2638,
Dipodomys ordii ENSDORG00000016024 possible_ortholog 1 retrogene
retro_dord_673,
Homo sapiens ENSG00000165119 ortholog_one2one 3 retrogenes
retro_hsap_2323, retro_hsap_2674, retro_hsap_3385,
Loxodonta africana ENSLAFG00000026567 possible_ortholog 1 retrogene
retro_lafr_809,
Macropus eugenii ENSMEUG00000006975 possible_ortholog 3 retrogenes
retro_meug_271, retro_meug_357, retro_meug_484,
Microcebus murinus ENSMICG00000015780 ortholog_one2one 3 retrogenes
retro_mmur_1562, retro_mmur_235, retro_mmur_448,
Myotis lucifugus ENSMLUG00000005871 ortholog_one2one 2 retrogenes
retro_mluc_128, retro_mluc_561,
Macaca mulatta ENSMMUG00000018871 possible_ortholog 1 retrogene
retro_mmul_2111,
Monodelphis domestica ENSMODG00000008402 possible_ortholog 1 retrogene
retro_mdom_1666,
Mus musculus ENSMUSG00000021546 ortholog_one2one 2 retrogenes
retro_mmus_1131, retro_mmus_2137,
Nomascus leucogenys ENSNLEG00000003486 possible_ortholog 3 retrogenes
retro_nleu_1178, retro_nleu_1815, retro_nleu_973,
Otolemur garnettii ENSOGAG00000007478 possible_ortholog 3 retrogenes
retro_ogar_2635, retro_ogar_2966, retro_ogar_3086,
Pongo abelii ENSPPYG00000004581 other_paralog 2 retrogenes
retro_pabe_3346, retro_pabe_92,
Sarcophilus harrisii ENSSHAG00000017109 possible_ortholog 1 retrogene
retro_shar_820,
Sus scrofa ENSSSCG00000022760 possible_ortholog 1 retrogene
retro_sscr_437,
Tupaia belangeri ENSTBEG00000001289 ortholog_one2one 1 retrogene
retro_tbel_2491,
Tarsius syrichta ENSTSYG00000001196 possible_ortholog 3 retrogenes
retro_tsyr_1664, retro_tsyr_1796, retro_tsyr_2149,
Tursiops truncatus ENSTTRG00000004906 ortholog_one2many 1 retrogene
retro_ttru_1622,
Tursiops truncatus ENSTTRG00000016693 ortholog_one2many 7 retrogenes
retro_ttru_1144, retro_ttru_180, retro_ttru_1922, retro_ttru_444, retro_ttru_813, retro_ttru_930, retro_ttru_937,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pabe_42 93.53 100.00
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2. retro_pabe_2105 80.78 54.53
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3. retro_pabe_2106 84.08 51.72
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Download FASTA sequences of all ENSPPYG00000019327 retrocopies