Parental gene: | HNRNPK, ENSPPYG00000019327 |
| Aliases: | HNRNPK, HNRPK |
| Description: | Heterogeneous nuclear ribonucleoprotein K [Source:UniProtKB/Swiss-Prot;Acc:Q5R5H8] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 9:79133096..79146989(-) |
>ENSPPYG00000019327
ATGGAAACTGAACAGCCAGAAGAAACCTTCCCTAACACTGAAACCAATGGTGAATTTGGTAAACGCCCTGCAGAAGATAT
GGAAGAGGAACAAGCATTTAAAAGATCTAGAAACACTGATGAGATGGTTGAATTACGCATTCTGCTTCAGAGCAAGAATG
CTGGGGCAGTGATTGGAAAAGGAGGCAAGAATATTAAGGCTCTCCGTACAGACTACAATGCCAGTGTTTCAGTCCCAGAC
AGCAGTGGCCCCGAGCGCATATTGAGTATCAGTGCTGATATTGAAACAATTGGAGAAATTCTGAAGAAAATCATCCCTAC
CTTGGAAGAGGGCCTGCAGTTGCCATCACCCACTGCAACCAGCCAGCTCCCGCTCGAATCTGATGCTGTGGAATGCTTAA
ATTACCAACACTATAAAGGAAGTGACTTTGACTGCGAGTTGAGGCTGTTGATTCATCAGAGTCTAGCAGGAGGAATTATT
GGGGTCAAAGGTGCTAAAATCAAAGAACTTCGAGAGAACACTCAAACCACCATCAAGCTTTTCCAGGAATGCTGTCCTCA
TTCCACTGACAGAGTTGTTCTTATTGGAGGAAAACCCGATAGGGTTGTAGAGTGCATAAAGATCATCCTTGATCTTATAT
CTGAGTCTCCCATCAAAGGACGTGCACAGCCTTACGATCCCAATTTTTACGATGAAACCTATGATTATGGTGGTTTTACA
ATGATGTTTGATGACCGCCGTGGACGCCCAGTGGGATTTCCAATGCGGGGAAGAGGTGGTTTTGACAGAATGCCTCCTGG
TCGGGGTGGGCGTCCCATGCCTCCATCTAGAAGAGATTATGATGATATGAGCCCTCGTCGAGGACCACCTCCCCCTCCTC
CTGGACGAGGCGGCCGGGGTGGTAGCAGAGCTCGGAATCTTCCTCTTCCTCCACCACCACCACCTAGAGGGGGAGACCTC
ATGGCCTATGACAGAAGAGGGAGACCTGGAGACCGTTACGATGGCATGGTTGGTTTCAGTGCTGATGAAACTTGGGACTC
TGCAATAGATACATGGAGCCCATCAGAATGGCAGATGGCTTATGAACCACAGGGTGGCTCTGGATATGATTATTCCTATG
CAGGGGGTCGTGGCTCATATGGTGATCTTGGTGGACCTATTATTACTACACAAGTAACTATTCCCAAAGATTTGGCTGGA
TCTATTATTGGCAAAGGTGGTCAGCGGATTAAACAAATCCGTCATGAGTCGGGAGCTTCGATCAAAATTGATGAGCCTTT
AGAAGGATCCGAAGATCGGATCATTACCATTACAGGAACACAGGACCAGATACAGAATGCACAGTATTTGCTGCAGAACA
GTGTGAAGCAGTATGCAGATGTTGAAGGATTCTAA
ATGGAAACTGAACAGCCAGAAGAAACCTTCCCTAACACTGAAACCAATGGTGAATTTGGTAAACGCCCTGCAGAAGATAT
GGAAGAGGAACAAGCATTTAAAAGATCTAGAAACACTGATGAGATGGTTGAATTACGCATTCTGCTTCAGAGCAAGAATG
CTGGGGCAGTGATTGGAAAAGGAGGCAAGAATATTAAGGCTCTCCGTACAGACTACAATGCCAGTGTTTCAGTCCCAGAC
AGCAGTGGCCCCGAGCGCATATTGAGTATCAGTGCTGATATTGAAACAATTGGAGAAATTCTGAAGAAAATCATCCCTAC
CTTGGAAGAGGGCCTGCAGTTGCCATCACCCACTGCAACCAGCCAGCTCCCGCTCGAATCTGATGCTGTGGAATGCTTAA
ATTACCAACACTATAAAGGAAGTGACTTTGACTGCGAGTTGAGGCTGTTGATTCATCAGAGTCTAGCAGGAGGAATTATT
GGGGTCAAAGGTGCTAAAATCAAAGAACTTCGAGAGAACACTCAAACCACCATCAAGCTTTTCCAGGAATGCTGTCCTCA
TTCCACTGACAGAGTTGTTCTTATTGGAGGAAAACCCGATAGGGTTGTAGAGTGCATAAAGATCATCCTTGATCTTATAT
CTGAGTCTCCCATCAAAGGACGTGCACAGCCTTACGATCCCAATTTTTACGATGAAACCTATGATTATGGTGGTTTTACA
ATGATGTTTGATGACCGCCGTGGACGCCCAGTGGGATTTCCAATGCGGGGAAGAGGTGGTTTTGACAGAATGCCTCCTGG
TCGGGGTGGGCGTCCCATGCCTCCATCTAGAAGAGATTATGATGATATGAGCCCTCGTCGAGGACCACCTCCCCCTCCTC
CTGGACGAGGCGGCCGGGGTGGTAGCAGAGCTCGGAATCTTCCTCTTCCTCCACCACCACCACCTAGAGGGGGAGACCTC
ATGGCCTATGACAGAAGAGGGAGACCTGGAGACCGTTACGATGGCATGGTTGGTTTCAGTGCTGATGAAACTTGGGACTC
TGCAATAGATACATGGAGCCCATCAGAATGGCAGATGGCTTATGAACCACAGGGTGGCTCTGGATATGATTATTCCTATG
CAGGGGGTCGTGGCTCATATGGTGATCTTGGTGGACCTATTATTACTACACAAGTAACTATTCCCAAAGATTTGGCTGGA
TCTATTATTGGCAAAGGTGGTCAGCGGATTAAACAAATCCGTCATGAGTCGGGAGCTTCGATCAAAATTGATGAGCCTTT
AGAAGGATCCGAAGATCGGATCATTACCATTACAGGAACACAGGACCAGATACAGAATGCACAGTATTTGCTGCAGAACA
GTGTGAAGCAGTATGCAGATGTTGAAGGATTCTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 279 .55 RPM |
| SRP007412_cerebellum | 257 .55 RPM |
| SRP007412_heart | 133 .15 RPM |
| SRP007412_kidney | 269 .95 RPM |
| SRP007412_liver | 212 .77 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000021131 | ortholog_one2one | 2 retrogenes | |
| Dasypus novemcinctus | ENSDNOG00000000026 | possible_ortholog | 4 retrogenes | |
| Dipodomys ordii | ENSDORG00000016024 | possible_ortholog | 1 retrogene | |
| Homo sapiens | ENSG00000165119 | ortholog_one2one | 3 retrogenes | |
| Loxodonta africana | ENSLAFG00000026567 | possible_ortholog | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000006975 | possible_ortholog | 3 retrogenes | |
| Microcebus murinus | ENSMICG00000015780 | ortholog_one2one | 3 retrogenes | |
| Myotis lucifugus | ENSMLUG00000005871 | ortholog_one2one | 2 retrogenes | |
| Macaca mulatta | ENSMMUG00000018871 | possible_ortholog | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000008402 | possible_ortholog | 1 retrogene | |
| Mus musculus | ENSMUSG00000021546 | ortholog_one2one | 2 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000003486 | possible_ortholog | 3 retrogenes | |
| Otolemur garnettii | ENSOGAG00000007478 | possible_ortholog | 3 retrogenes | |
| Pongo abelii | ENSPPYG00000004581 | other_paralog | 2 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000017109 | possible_ortholog | 1 retrogene | |
| Sus scrofa | ENSSSCG00000022760 | possible_ortholog | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000001289 | ortholog_one2one | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000001196 | possible_ortholog | 3 retrogenes | |
| Tursiops truncatus | ENSTTRG00000004906 | ortholog_one2many | 1 retrogene | |
| Tursiops truncatus | ENSTTRG00000016693 | ortholog_one2many | 7 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_42 | 93.53 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pabe_2105 | 80.78 | 54.53 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_pabe_2106 | 84.08 | 51.72 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000019327 retrocopies