Parental gene:

ENSSHAG00000017109

Aliases:None
Description:None
Organism:Tasmanian devil (Sarcophilus harrisii)
Coordinates:GL841540.1:2516015..2529174(+)


>ENSSHAG00000017109
ATGGAGACTGAGCAACCAGAAGAAACCTTCCCCAATACTGAAACTAATGGTGAATTTGGTAAACGCCCTGCTGAAGATAT
GGAGGAGGAGCAGGCCTTTAAAAGATCTAGAAACACTGACGAGATGGTTGAACTGCGCATTTTGCTTCAAAGCAAGAATG
CTGGAGCAGTGATTGGGAAAGGAGGCAAAAATATCAAAGCTCTTCGTACAGACTACAATGCCAGTGTTTCAGTCCCAGAC
AGCAGTGGCCCCGAGCGCATATTGAGTATCAGTGCAGATATTGAAACAATTGGAGAAATTCTGAAGAAAATCATCCCTAC
CTTGGAAGAGTATCAACACTATAAAGGAAGCGACTTTGACTGCGAGTTGAGACTGTTGATTCACCAGAGTCTGGCAGGAG
GAATTATTGGGGTCAAAGGTGCTAAAATCAAAGAACTTCGAGAGAACACTCAGACAACTATCAAGCTTTTCCAGGAATGC
TGTCCTCATTCCACGGATCGAGTTGTTCTTATCGGTGGAAAGCCTGATAGGGTTGTGGAGTGCATCAAGATCATACTGGA
TCTTATATCTGAGTCTCCTATCAAAGGACGTGCACAACCCTATGATCCCAATTTCTATGATGAAACCTATGACTATGGTG
GTTTCACAATGATGTTTGATGATCGACGAGGACGCCCTGTAGGATTTCCCATGCGGGGAAGGGGAGGCTTTGACAGAATG
CCCCCAGGCCGTGGTGGGCGTCCTATGCCCCCATCCAGAAGAGATTATGATGACATGAGCCCTCGCAGAGGACCCCCACC
ACCTCCTCCTGGACGTGGTGGCAGGGGTGGTAGCAGAGCTCGAAATCTTCCTCTTCCACCACCACCACCACCTAGAGGAG
GCGATCTTATGGCTTATGACAGAAGAGGAAGACCCGGTGACCGTTATGATGGCATGGTTGGTTTTAGTGCTGATGAGACT
TGGGACTCTGCAATAGATACTTGGAGTCCTTCCGAATGGCAGATGGCTTATGAACCACAGGGTGGTTCTGGATATGATTA
TTCCTATGCAGGGGGCCGTGGCTCATACGGTGATCTTGGTGGACCCATTATTACAACACAAGTAACTATTCCCAAAGATT
TGGCTGGATCTATTATTGGCAAAGGTGGTCAGCGAATCAAACAAATACGTCATGAATCTGGAGCATCAATCAAAATTGAT
GAGCCTTTGGAAGGATCTGAGGATCGAATTATAACCATTACAGGAACACAGGACCAGATACAGAATGCACAGTATTTACT
GCAAAACAGTGTGAAGCAGTATGCAGATGTTGAAGGATTCTAA

Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000021131 possible_ortholog 2 retrogenes
retro_btau_468, retro_btau_605,
Choloepus hoffmanni ENSCHOG00000010832 possible_ortholog 2 retrogenes
retro_chof_1023, retro_chof_1589,
Dasypus novemcinctus ENSDNOG00000000026 possible_ortholog 4 retrogenes
retro_dnov_1433, retro_dnov_1820, retro_dnov_2316, retro_dnov_2638,
Dipodomys ordii ENSDORG00000016024 possible_ortholog 1 retrogene
retro_dord_673,
Homo sapiens ENSG00000165119 possible_ortholog 3 retrogenes
retro_hsap_2323, retro_hsap_2674, retro_hsap_3385,
Gorilla gorilla ENSGGOG00000015500 possible_ortholog 2 retrogenes
retro_ggor_1764, retro_ggor_1866,
Loxodonta africana ENSLAFG00000026567 possible_ortholog 1 retrogene
retro_lafr_809,
Macropus eugenii ENSMEUG00000006975 possible_ortholog 3 retrogenes
retro_meug_271, retro_meug_357, retro_meug_484,
Microcebus murinus ENSMICG00000015780 possible_ortholog 3 retrogenes
retro_mmur_1562, retro_mmur_235, retro_mmur_448,
Myotis lucifugus ENSMLUG00000005871 possible_ortholog 2 retrogenes
retro_mluc_128, retro_mluc_561,
Macaca mulatta ENSMMUG00000018871 possible_ortholog 1 retrogene
retro_mmul_2111,
Monodelphis domestica ENSMODG00000008402 ortholog_one2one 1 retrogene
retro_mdom_1666,
Mus musculus ENSMUSG00000021546 possible_ortholog 2 retrogenes
retro_mmus_1131, retro_mmus_2137,
Nomascus leucogenys ENSNLEG00000003486 possible_ortholog 3 retrogenes
retro_nleu_1178, retro_nleu_1815, retro_nleu_973,
Otolemur garnettii ENSOGAG00000007478 ortholog_one2many 3 retrogenes
retro_ogar_2635, retro_ogar_2966, retro_ogar_3086,
Pongo abelii ENSPPYG00000019327 possible_ortholog 3 retrogenes
retro_pabe_2105, retro_pabe_2106, retro_pabe_42,
Sus scrofa ENSSSCG00000022760 ortholog_one2one 1 retrogene
retro_sscr_437,
Tupaia belangeri ENSTBEG00000001289 possible_ortholog 1 retrogene
retro_tbel_2491,
Tarsius syrichta ENSTSYG00000001196 possible_ortholog 3 retrogenes
retro_tsyr_1664, retro_tsyr_1796, retro_tsyr_2149,
Tursiops truncatus ENSTTRG00000004906 possible_ortholog 1 retrogene
retro_ttru_1622,
Tursiops truncatus ENSTTRG00000016693 possible_ortholog 7 retrogenes
retro_ttru_1144, retro_ttru_180, retro_ttru_1922, retro_ttru_444, retro_ttru_813, retro_ttru_930, retro_ttru_937,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_shar_820 65.37 73.54
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Download FASTA sequences of all ENSSHAG00000017109 retrocopies