RetrogeneDB ID: | retro_ogar_2635 | ||
Retrocopylocation | Organism: | Bushbaby (Otolemur garnettii) | |
Coordinates: | GL873642.1:4950923..4951913(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSOGAG00000007478 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 87.58 % |
Parental protein coverage: | 75. % |
Number of stop codons detected: | 6 |
Number of frameshifts detected | 0 |
Parental | YQHYKGSDFDCELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQECCPHSTDRVVLIGGKPDRVVE |
YQHYKG.D.DC.LRLLIHQSLAGGIIGVK.A.IKEL.ENTQT.IKLFQECCPHS.DRV.LIG.K.DRVVE | |
Retrocopy | YQHYKGNDIDCKLRLLIHQSLAGGIIGVKSA*IKEL*ENTQTSIKLFQECCPHSSDRVILIGEKLDRVVE |
Parental | CIKIILDLISESPIKGRAQPYDPNFYDETYDYGGFTMMFDDRRGRPVGFPMRGRGGFDRMPPGRGGRPMP |
.IKIILDLISESPIKG.AQPYDPNFYDETYDYGGFTMMFDD..G.PVGFP..GRG.FDRMPPG.GGR.MP | |
Retrocopy | FIKIILDLISESPIKGCAQPYDPNFYDETYDYGGFTMMFDDHCG*PVGFPVQGRGSFDRMPPGWGGRLMP |
Parental | PSRRDYDDMSPRRGPPPPPPGRGGRGGSRARNLPLPPPPPPRGGDLMAYDRRGRPGDRYDGMVGFSADET |
PSRRD.DDMSP.R.PPPPPPGRGGRGGSRA.NLPL.PPPPPRGGDLMAYDRR.RPGDR.DGMV.FSADET | |
Retrocopy | PSRRD*DDMSPHRRPPPPPPGRGGRGGSRAQNLPLLPPPPPRGGDLMAYDRRRRPGDR*DGMVRFSADET |
Parental | WDSAIDTWSPSEWQMAYEPQGGSGYDYSYAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIR |
.DSAIDTWSPSEW.MAYEPQGGS.Y.YSYAGG..SYGDLGGPIITTQVTIPKDLAGSIIGKGGQ.IKQI. | |
Retrocopy | IDSAIDTWSPSEWWMAYEPQGGSRYAYSYAGGHSSYGDLGGPIITTQVTIPKDLAGSIIGKGGQQIKQIC |
Parental | HESGASIKIDEPLEGSEDRIITITGTQDQIQNAQYLLQNSVKQYADVEGF |
HESGASIKI.EPLEGS.DRIITITGTQDQIQNAQYLLQ.SVKQ.ADVEGF | |
Retrocopy | HESGASIKINEPLEGSKDRIITITGTQDQIQNAQYLLQKSVKQ*ADVEGF |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |