Parental gene:

OXCT1, ENSOCUG00000009231

Aliases:None
Description:3-oxoacid CoA transferase 1 [Source:HGNC Symbol;Acc:8527]
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:11:62591043..62763746(-)


>ENSOCUG00000009231
ATGGCGGCTCTCAAACTCCTCTCCTTCGGGCCACGGCTCTGCGCCTCCGCCCGCGGCTCCGGGCGCGCCTGGGCCAAGGG
GTCTGCTTGCTACTTTTCCACCAGTAGTCATCGCCAGACAAAATTTTATGCAGATCCAGTAGAAGCTGTAAAAGACATCC
CTGATGGTGCAACGATTCTGGTTGGCGGTTTTGGGCTATGTGGAATTCCAGAGAATCTTATAGGAGCTTTACTAAAGACT
GGAGTCAAAGGATTAACTGCAGTCAGCAATAATGCAGGGGTAGACAACTTTGGCTTGGGCCTTTTACTTCGATCCAAGCA
GATAAAACGCATGGTCTCTTCGTATGTGGGAGAAAATGCAGAATTCGAGCGACAGTTCCTATCTGGTGAATTAGAAGTAG
AGTTGACACCACAGGGCACACTTGCAGAGAGGATTCGAGCAGGAGGGGCTGGAGTTCCTGCGTTTTATACCAGCACTGGC
TATGGGACCCTGGTCCAAGAAGGAGGATCACCCATCAAATACAACAAAGATGGCAGCATCGCCATTGCCAGCAAGCCAAG
AGAGGTGAGGGAGTTTAACGGCCAGCACTTCATTCTGGAGGAGGCGATTACAGGAGATTTTGCTTTGGTGAAAGCCTGGA
AGGCAGACCGAGCTGGAAATGTGATTTTCAGGAAGAGTGCAAGAAATTTCAACCTGCCCATGTGCAAAGCTGCGGAAACC
ACCGTGGTGGAGGTTGAAGAAATTGTAGATATTGGATCATTTGCTCCGGAAGATATTCATATTCCTAAAATTTATGTCCA
TCGCCTTATAAAAGGAGAAAAATATGAGAAACGAATTGAGCGCTTATCAATACGGAAGGAAGGCGATGGAAAGGCCAAAT
CCACTCAGGCTGGAGATAACGTAAGGGAACGCATCATCAGGCGGGCAGCTCTGGAGTTCGAGGACGGCATGTATGCTAAT
CTGGGCATAGGGATCCCTCTTCTGGCCAGCAACTTTATCAGCCCAAACATGACTGTTCATCTTCAAAGTGAAAATGGAGT
CCTGGGTTTGGGACCATATCCATTACAACATGAAGCTGATGCAGACCTAATCAATGCAGGCAAAGAAACAGTTACTGTTC
TTCCAGGAGCCTCTTTTTTCTCCAGCGATGAATCATTTGCAATGATTAGAGGAGGACATGTCAATCTGACAATGCTAGGA
GCAATGCAAGTTTCCAAATATGGTGACCTGGCTAACTGGATGATACCTGGGAAGATGGTGAAAGGAATGGGAGGTGCTAT
GGATTTGGTGTCCAGCGCCAAAACCAAAGTGGTAGTCACCATGGAACATTCAGCAAAGGGTAATGCACATAAAATCATGG
AGAAATGTACTTTACCACTGACTGGAAAGCAATGTGTCAACCGCATCATTACAGAAAAGGCCGTGTTTGATGTGGACAAG
AAGAAGGGCCTGACGCTGATCGAGCTCTGGGAAGGCCTCACAGTTGAGGACATACAAAAGAGCACTGGATGTGATTTTGC
AGTTTCGCCAAAACTTATGCCGATGCAACAGATCACGACTTGA

Library Parental gene expression (RPM)
SRP017611_brain 59 .49 RPM
SRP017611_kidney 487 .83 RPM
SRP017611_liver 4 .08 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000033186 ortholog_one2one 2 retrogenes
retro_btau_1243, retro_btau_1302,
Dipodomys ordii ENSDORG00000016318 ortholog_one2one 1 retrogene
retro_dord_282,
Equus caballus ENSECAG00000018312 ortholog_one2one 1 retrogene
retro_ecab_511,
Homo sapiens ENSG00000083720 ortholog_one2one 1 retrogene
retro_hsap_14,
Gorilla gorilla ENSGGOG00000025087 ortholog_one2one 1 retrogene
retro_ggor_378,
Myotis lucifugus ENSMLUG00000009431 ortholog_one2many 1 retrogene
retro_mluc_194,
Nomascus leucogenys ENSNLEG00000016656 ortholog_one2one 1 retrogene
retro_nleu_2438,
Otolemur garnettii ENSOGAG00000009909 ortholog_one2one 2 retrogenes
retro_ogar_2773, retro_ogar_2781,
Pongo abelii ENSPPYG00000015428 ortholog_one2one 2 retrogenes
retro_pabe_336, retro_pabe_478,
Pan troglodytes ENSPTRG00000016829 ortholog_one2one 1 retrogene
retro_ptro_140,
Rattus norvegicus ENSRNOG00000043094 ortholog_one2one 2 retrogenes
retro_rnor_2177, retro_rnor_2256,
Ictidomys tridecemlineatus ENSSTOG00000008271 ortholog_one2one 1 retrogene
retro_itri_747,
Tarsius syrichta ENSTSYG00000013641 ortholog_one2one 1 retrogene
retro_tsyr_1455,
Tursiops truncatus ENSTTRG00000004331 ortholog_one2one 1 retrogene
retro_ttru_875,
Vicugna pacos ENSVPAG00000002550 ortholog_one2one 1 retrogene
retro_vpac_556,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_672 73.17 91.73
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSOCUG00000009231 retrocopies