Parental gene:

EIF4H, ENSOCUG00000017685

Aliases:None
Description:eukaryotic translation initiation factor 4H [Source:HGNC Symbol;Acc:12741]
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:GL018765:575556..582365(-)


>ENSOCUG00000017685
CTCACAGAATACAGCCTCAGGAGCAGGCCGTGGGGCTCGCTGGGAAGCGGCCGCAGGTCCCGCGGCAGTGCTGGCGGCCA
TGGGTCCCGTAGCCAGAAGGAGCTGCCCACAGAGCCCCCCTACACGGCATATGTAGGAAATCTACCTTTTAACACGGTGC
AGGGCGACATAGACGCTATCTTTAAGGATCTCAGCATAAGGAGTGTACGGCTAGTCAGAGACAAAGACACAGACAAGTTT
AAAGGGTTCTGCTATGTAGAATTCGACGAGGTGGACTCCCTTAAGGAAGCCCTGACGTATGACGGTGCCCTGTTGGGTGA
CCGGTCACTTCGCGTGGACATTGCCGAAGGCAGAAAACAGGACAAAGGTGGCTTTGGATTCAGGAGAGGTGGACCAGACG
ACAGAGAATCAAGAGGTGGCTGGGATTCCCGGGCTGACTTCAGCTCTGGGGGTCCACTCTGCCTGCGCTTCAGGGATGAC
TTCCTAGGAGGCAGGGGGGGCAGCCGCCCTGGGGACCGGCGAGCAGGCCCCCCGATGGGAAGTCGCTTCAGAGACGGCCC
CCCGCTGCGCGGCCCCAACATGGACTTCAGAGAACCCACAGAAGAGGAAAGAGCACAGAGACCCCGGCTCCAGCTTAAAC
CTCGGACAGTCGCCACGCCCCTCAACCAAGTCGCCAATCCCAACTCTGCTATCTTCGGGGGAGCCAGGCCCAGAGAGGAA
GTGGTCCACAAGGAGCAAGAATGA

Library Parental gene expression (RPM)
SRP017611_liver 28 .59 RPM
SRP017611_kidney 56 .15 RPM
SRP017611_brain 84 .16 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000002525 ortholog_one2one 2 retrogenes
retro_chof_1279, retro_chof_1903,
Felis catus ENSFCAG00000029386 ortholog_one2one 1 retrogene
retro_fcat_580,
Gorilla gorilla ENSGGOG00000005284 ortholog_one2one 1 retrogene
retro_ggor_1598,
Macaca mulatta ENSMMUG00000006205 ortholog_one2one 2 retrogenes
retro_mmul_2634, retro_mmul_619,
Mus musculus ENSMUSG00000040731 ortholog_one2one 1 retrogene
retro_mmus_3659,
Otolemur garnettii ENSOGAG00000028051 ortholog_one2one 1 retrogene
retro_ogar_2796,
Pongo abelii ENSPPYG00000017489 ortholog_one2one 2 retrogenes
retro_pabe_1879, retro_pabe_1988,
Pan troglodytes ENSPTRG00000019287 ortholog_one2one 1 retrogene
retro_ptro_1489,
Rattus norvegicus ENSRNOG00000001454 ortholog_one2one 1 retrogene
retro_rnor_2924,
Tupaia belangeri ENSTBEG00000009558 ortholog_one2one 2 retrogenes
retro_tbel_1636, retro_tbel_2470,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_1475 63.08 51.01
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Download FASTA sequences of all ENSOCUG00000017685 retrocopies