Parental gene:

MMU.2847, ENSMMUG00000006205

Aliases:None
Description:eukaryotic translation initiation factor 4H [Source:RefSeq peptide;Acc:NP_001252991]
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:3:51617588..51643972(+)


>ENSMMUG00000006205
ATGGCGGACTTCGATACCTACGACGATCGGGCCTACAGCAGCTTCGGCGGCGGCAGAGGGTCCCGCGGCAGTGCTGGTGG
CCATGGTTCCCGTAGCCAGAAGGAGTTGCCCACAGAGCCCCCCTACACAGCCTACGTAGGAAATCTACCTTTTAATACGG
TTCAGGGCGACATAGATGCTATCTTTAAGGATCTCAGCATAAGGAGTATACGGCTAGTCAGAGACAAAGACACAGATAAA
TTTAAAGGATTCTGCTATGTAGAATTCGATGAAGTGGATTCCCTTAAGGAAGCCTTGACATACGATGGTGCACTGTTGGG
CGATCGGTCACTTCGTGTGGACATTGCAGAAGGCAGAAAACAAGACAAAGGTGGCTTTGGATTCAGAAAAGGAGGACCAG
ATGACAGAGGAATGGGTAGCTCTCGAGAATCTAGAGGTGGATGGGATTCCCGGGATGACTTCAATTCTGGCTTCAGGGAT
GACTTCTTAGGGGGCAGGGGAGGTAGTCGCCCAGGTGACCGGCGAACAGGCCCCCCCATGGGCAGCCGCTTCAGAGATGG
CCCTCCCCTCCGCGGATCCAACATGGATTTCCGAGAACCCACAGAAGAGGAAAGAGCACAGAGACCACGACTCCAGCTTA
AACCTCGAACAGTCGCGACTCCCCTCAATCAAGTAGCCAATCCCAACTCTGCTATCTTCGGGGGTGCCAGACCTAGAGAG
GAAGTCGTTCAAAAGGAGCAAGAATGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 252 .75 RPM
SRP007412_brain 191 .49 RPM
SRP007412_cerebellum 185 .78 RPM
SRP007412_heart 122 .01 RPM
SRP007412_kidney 133 .10 RPM
SRP007412_liver 104 .86 RPM
SRP007412_testis 121 .64 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000002525 ortholog_one2one 2 retrogenes
retro_chof_1279, retro_chof_1903,
Felis catus ENSFCAG00000029386 ortholog_one2one 1 retrogene
retro_fcat_580,
Gorilla gorilla ENSGGOG00000005284 ortholog_one2one 1 retrogene
retro_ggor_1598,
Macaca mulatta ENSMMUG00000001062 within_species_paralog 5 retrogenes
retro_mmul_1428, retro_mmul_2384, retro_mmul_2589, retro_mmul_731, retro_mmul_783,
Mus musculus ENSMUSG00000040731 ortholog_one2one 1 retrogene
retro_mmus_3659,
Oryctolagus cuniculus ENSOCUG00000017685 ortholog_one2one 1 retrogene
retro_ocun_1475,
Otolemur garnettii ENSOGAG00000028051 ortholog_one2one 1 retrogene
retro_ogar_2796,
Pongo abelii ENSPPYG00000017489 ortholog_one2one 2 retrogenes
retro_pabe_1879, retro_pabe_1988,
Pan troglodytes ENSPTRG00000019287 ortholog_one2one 1 retrogene
retro_ptro_1489,
Rattus norvegicus ENSRNOG00000001454 ortholog_one2one 1 retrogene
retro_rnor_2924,
Tupaia belangeri ENSTBEG00000009558 ortholog_one2one 2 retrogenes
retro_tbel_1636, retro_tbel_2470,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_619 82.61 89.91
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2. retro_mmul_2634 88.35 100.00
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Download FASTA sequences of all ENSMMUG00000006205 retrocopies