Parental gene:

ATF1, ENSPCAG00000010038

Aliases:None
Description:activating transcription factor 1 [Source:HGNC Symbol;Acc:783]
Organism:Hyrax (Procavia capensis)
Coordinates:GeneScaffold_2617:1131..38227(+)


>ENSPCAG00000010038
ATGGAAGATTCCCACAAGAGGAACACTTCAGAGACAGCACCTCAACCCAGTTCAGCAGCTCAGGGAGCTCATGTCTCTCA
TATTGCTCAACAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNTTGCCATTGCCCCAAATGGAGCCTTACAGCTGGCCAGTCCAGGCACAGATGGAGTACAGGGACTTCCAGCGT
TGACCATGACAAATTCAGGCAGTGGTCAGCAAGGTACAACAATTCTCCAGTATGCACAGACCTCTGATGGACAGCAGATA
CTTGTGCCCAGCAATCAGGTGGTTGTACAGACCGCATCAGGAGATATGCAGACATACCAGATCCGTACCACACCTTCAGC
TACTTCACTACCACAGACTGTGGTGATGACATCTCCTGTGACTCTTACATCTCAGACAACTAAGACAGATGACCCTCAGT
TGAAAAGAGAAATAAGGTTGATGAAAAACAGAGAAGCAGCTCGAGAATGTCGCAGAAAGAAGAAGGAATATGTCAAATGC
CTGGAAAATAGAGTTGCTGTTCTGGAAAACCAAAATAAAACTCTAATAGAAGAGTTAAAAACTTTGAAGGATCTTTATTC
CCATAAAAGTGTTTGA

Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000004733 ortholog_one2one 5 retrogenes
retro_chof_1987, retro_chof_2305, retro_chof_27, retro_chof_462, retro_chof_760,
Erinaceus europaeus ENSEEUG00000008000 ortholog_one2one 2 retrogenes
retro_eeur_332, retro_eeur_704,
Homo sapiens ENSG00000123268 ortholog_one2one 1 retrogene
retro_hsap_3633,
Mus musculus ENSMUSG00000023027 ortholog_one2one 1 retrogene
retro_mmus_3609,
Oryctolagus cuniculus ENSOCUG00000017023 ortholog_one2one 1 retrogene
retro_ocun_383,
Otolemur garnettii ENSOGAG00000026029 ortholog_one2one 1 retrogene
retro_ogar_1378,
Sarcophilus harrisii ENSSHAG00000004637 ortholog_one2one 2 retrogenes
retro_shar_221, retro_shar_635,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_pcap_303 71.43 59.04
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2. retro_pcap_442 85.09 59.41
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Download FASTA sequences of all ENSPCAG00000010038 retrocopies