Parental gene: | ATF1, ENSCHOG00000004733 |
| Aliases: | None |
| Description: | activating transcription factor 1 [Source:HGNC Symbol;Acc:783] |
| Organism: | Sloth (Choloepus hoffmanni) |
| Coordinates: | GeneScaffold_2807:113..11927(+) |
>ENSCHOG00000004733
ATGGAAGCTTCACACAAGAGTAACTCTCCAGAGACAGCACCTCAACCAAGTTCAGCAGTTCAGGGAGCTCATATCTCTCA
TATTGCTCAACAGGCATCATCCTTATCAGAAAGTGAGGAGTCTCAAGACTCATCTGACAGCATAGGCTCCTCACAGAAAA
CCCATGGGATTCTAGCACGGCGCCCATCTTACAGAAAAATTTTGAAAGACCTATCTTCTGAAGATATACGGGGCAGAAAA
GGAGACGGAGAAAACCCTGGAGTCTCTACTGTCACTTCTATGTCTGTTCCAACTCCCATCTATCAGACTAGCACCGGCCA
GTACATTGCCATTGCCCCAAATGGAGCCTTACAGCTGGCCAGTCCAGGCACAGATGGAGTACAGGGACTTCAGACATTAA
CCATGACAAATTCAGGCAGTTCTCAGCAAGGTACAACAACAATTCTCCAGTATGCACAGACCTCTGATGGACAGCAAATA
CTTGTGCCCAGCAATCAGGTGGTGGTACAGACTGCATCAGGAGATATGCAGACATATCAGATCCGTACCACACCAACTGC
TTCTTCATTGCCACAAACTGTGGTAATGACATCACCTGTGAATCTTACATCTCAGACAACTAAGACAGATGACCCCCAAC
TGAAAAGAGAAATAAGGTTAATGAAAAACAGAGAGGCTGCTCGAGAATGTCGGAGAAAGAAGAAAGAATATGTGAAATGC
CTGGAAAATCGAGTTGCAGTCCTGGAAAATCAAAATAAAACTTTAATAGAAGAGTTAAAAACTTTGAAGGATCTTTATTC
CCATAAAAGTGTTTGA
ATGGAAGCTTCACACAAGAGTAACTCTCCAGAGACAGCACCTCAACCAAGTTCAGCAGTTCAGGGAGCTCATATCTCTCA
TATTGCTCAACAGGCATCATCCTTATCAGAAAGTGAGGAGTCTCAAGACTCATCTGACAGCATAGGCTCCTCACAGAAAA
CCCATGGGATTCTAGCACGGCGCCCATCTTACAGAAAAATTTTGAAAGACCTATCTTCTGAAGATATACGGGGCAGAAAA
GGAGACGGAGAAAACCCTGGAGTCTCTACTGTCACTTCTATGTCTGTTCCAACTCCCATCTATCAGACTAGCACCGGCCA
GTACATTGCCATTGCCCCAAATGGAGCCTTACAGCTGGCCAGTCCAGGCACAGATGGAGTACAGGGACTTCAGACATTAA
CCATGACAAATTCAGGCAGTTCTCAGCAAGGTACAACAACAATTCTCCAGTATGCACAGACCTCTGATGGACAGCAAATA
CTTGTGCCCAGCAATCAGGTGGTGGTACAGACTGCATCAGGAGATATGCAGACATATCAGATCCGTACCACACCAACTGC
TTCTTCATTGCCACAAACTGTGGTAATGACATCACCTGTGAATCTTACATCTCAGACAACTAAGACAGATGACCCCCAAC
TGAAAAGAGAAATAAGGTTAATGAAAAACAGAGAGGCTGCTCGAGAATGTCGGAGAAAGAAGAAAGAATATGTGAAATGC
CTGGAAAATCGAGTTGCAGTCCTGGAAAATCAAAATAAAACTTTAATAGAAGAGTTAAAAACTTTGAAGGATCTTTATTC
CCATAAAAGTGTTTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Erinaceus europaeus | ENSEEUG00000008000 | ortholog_one2one | 2 retrogenes | |
| Felis catus | ENSFCAG00000013892 | possible_ortholog | 1 retrogene | |
| Homo sapiens | ENSG00000123268 | ortholog_one2one | 1 retrogene | |
| Microcebus murinus | ENSMICG00000003301 | possible_ortholog | 1 retrogene | |
| Mus musculus | ENSMUSG00000023027 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000017023 | ortholog_one2one | 1 retrogene | |
| Procavia capensis | ENSPCAG00000010038 | ortholog_one2one | 2 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000004637 | ortholog_one2many | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_chof_27 | 94.96 | 51.29 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_chof_462 | 95.63 | 76.01 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_chof_760 | 81.53 | 91.51 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_chof_1987 | 76.19 | 53.87 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_chof_2305 | 80.17 | 88.56 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCHOG00000004733 retrocopies