Parental gene: | PERP, ENSPPYG00000017043 |
| Aliases: | None |
| Description: | PERP, TP53 apoptosis effector [Source:HGNC Symbol;Acc:17637] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 6:140953105..140970778(-) |
>ENSPPYG00000017043
ATGATCCGCTGCGGCCTGGCCTGCGAGCGCTGCCGCTGGATCCTGCCCCTGCTCCTACTCAGCGCCATCGCCTTCGACAT
CATCGCGCTGGCCGGCCGCGGCTGGTTGCAGTCTAGCGACCACATCCAGACATCCTCGCTGTGGTGGAAATGCTCCCAAG
AGGGCGGCGGCAGCGGGTCCTACGAGGAGGGCTGTCAGAGCCTCATGGAGTACGCATGGGGCAAAACAGCGGCTGCCATG
CTCTTTTGGGGCTTCCTCATCCTGGTGAATCTGTTTCATCCTCNNNNTCTTCGCCCTCTGTGGACCCCAGATGCTCGTCT
TCTAAGAGTAATTGGAGGTCTCCTTGCCTTGGCTGCTGTGTTCCAGATCATCTCCCTGGTAATTTACCCCGTGAAGTACA
CCCAGACCTTCGCCCTTCATGCCAACCCCGCTGTCACTTACATCTATAACTGGGCCTACGGCTTTGGGTGGGCAGCCACG
ATTATCCTGATCGGCTGTGCCTTCTTCTTCTGCTGCCTCCCCAACTACGAAGATGACCTTCTGGGCAATGCCAAGCCCAG
GTACTTCTACACATCTGCCTAA
ATGATCCGCTGCGGCCTGGCCTGCGAGCGCTGCCGCTGGATCCTGCCCCTGCTCCTACTCAGCGCCATCGCCTTCGACAT
CATCGCGCTGGCCGGCCGCGGCTGGTTGCAGTCTAGCGACCACATCCAGACATCCTCGCTGTGGTGGAAATGCTCCCAAG
AGGGCGGCGGCAGCGGGTCCTACGAGGAGGGCTGTCAGAGCCTCATGGAGTACGCATGGGGCAAAACAGCGGCTGCCATG
CTCTTTTGGGGCTTCCTCATCCTGGTGAATCTGTTTCATCCTCNNNNTCTTCGCCCTCTGTGGACCCCAGATGCTCGTCT
TCTAAGAGTAATTGGAGGTCTCCTTGCCTTGGCTGCTGTGTTCCAGATCATCTCCCTGGTAATTTACCCCGTGAAGTACA
CCCAGACCTTCGCCCTTCATGCCAACCCCGCTGTCACTTACATCTATAACTGGGCCTACGGCTTTGGGTGGGCAGCCACG
ATTATCCTGATCGGCTGTGCCTTCTTCTTCTGCTGCCTCCCCAACTACGAAGATGACCTTCTGGGCAATGCCAAGCCCAG
GTACTTCTACACATCTGCCTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 2 .88 RPM |
| SRP007412_cerebellum | 7 .66 RPM |
| SRP007412_heart | 46 .09 RPM |
| SRP007412_kidney | 30 .73 RPM |
| SRP007412_liver | 16 .80 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000020097 | ortholog_one2many | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000019024 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000112378 | ortholog_one2one | 2 retrogenes | |
| Gorilla gorilla | ENSGGOG00000028340 | ortholog_one2one | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000004872 | ortholog_one2one | 1 retrogene | |
| Microcebus murinus | ENSMICG00000013979 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000001473 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000000997 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000014930 | ortholog_one2one | 2 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000004238 | ortholog_one2many | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000011669 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_1267 | 82.00 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pabe_2400 | 60.53 | 76.68 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_pabe_2416 | 62.41 | 70.98 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000017043 retrocopies