RetrogeneDB ID: | retro_mmur_353 | ||
Retrocopylocation | Organism: | Mouse Lemur (Microcebus murinus) | |
Coordinates: | GeneScaffold_2558:128654..129233(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | PERP | ||
Ensembl ID: | ENSMICG00000013979 | ||
Aliases: | None | ||
Description: | PERP, TP53 apoptosis effector [Source:HGNC Symbol;Acc:17637] |
Percent Identity: | 82.38 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MLRCGLACERCRWILPLLLLSAVVFDIIALAGPRWLQSDDHHQTSSL--KCTGE-GGSGSGD--CQSLD- |
MLRCGL.CERCRWILPLLLLSA..FDI.AL.G..WLQS..H.QTSSL...C.GE.GGSGS....C.SL.. | |
Retrocopy | MLRCGLVCERCRWILPLLLLSAIAFDIVALSGRGWLQSSTHIQTSSLWWRCPGERGGSGSPEQGCESLMV |
Parental | FAWGRAAAAMLFCGFIILVICFILSFFALCGPQMLVFLRVIGGLLALAAVFQIIALVIYPVKYTQTFKLH |
.AWGRAAAA.LFCGFIILVICFILSFFALCGPQMLVFLRVIGGLLALAAVFQII.LVIYPVKYTQTF.LH | |
Retrocopy | YAWGRAAAATLFCGFIILVICFILSFFALCGPQMLVFLRVIGGLLALAAVFQIISLVIYPVKYTQTFNLH |
Parental | EEPSVTFIYNWAYGFGWAATIILIGCSFFFCCLPNYEDDLLGNAKPRYLYASA |
..P.VT.IYNWAYGFGWAAT.ILIGC.FFFCCLPNYEDDLLGNAKPRY.Y.SA | |
Retrocopy | ANPAVTYIYNWAYGFGWAATVILIGCAFFFCCLPNYEDDLLGNAKPRYFYTSA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |
Species | Parental gene accession | Retrocopies number | |
---|---|---|---|
Bos taurus | ENSBTAG00000020097 | 1 retrocopy | |
Callithrix jacchus | ENSCJAG00000019024 | 1 retrocopy | |
Homo sapiens | ENSG00000112378 | 2 retrocopies | |
Gorilla gorilla | ENSGGOG00000028340 | 1 retrocopy | |
Macropus eugenii | ENSMEUG00000004872 | 1 retrocopy | |
Microcebus murinus | ENSMICG00000013979 | 1 retrocopy |
retro_mmur_353 ,
|
Myotis lucifugus | ENSMLUG00000001473 | 1 retrocopy | |
Macaca mulatta | ENSMMUG00000000997 | 1 retrocopy | |
Nomascus leucogenys | ENSNLEG00000014930 | 2 retrocopies | |
Oryctolagus cuniculus | ENSOCUG00000004238 | 1 retrocopy | |
Otolemur garnettii | ENSOGAG00000011669 | 1 retrocopy | |
Pongo abelii | ENSPPYG00000017043 | 3 retrocopies |