Parental gene: | RDH13, ENSPTRG00000011484 |
| Aliases: | None |
| Description: | None |
| Organism: | Chimpanzee (Pan troglodytes) |
| Coordinates: | 19:59956417..59976491(-) |
>ENSPTRG00000011484
ATGAGCCGCTACCTGCTGCCGCTGTCGGCGCTGGGCACGGTAGCAGGCGCCGCCGTGCTGCTCAAGGACTATGTCACCGG
TGGGGCTTGCCCCAGCAAGGCCACCATCCCTGGGAAGACGGTCATCGTGACGGGCGCCAACACAGGCATCGGGAAGCAGA
CCGCCTTGGAACTGGCCAGGAGAGGAGGCAACATCATCCTGGCCTGCCGAGACATGGAGAAGTGTGAGGCGGCAGCAAAG
GACATCCGCGGGGAGACCCTCAATCACCATGTCAACGCCCGGCACCTGGACTTGGCTTCCCTCAAGTCTATCCGAGAGTT
TGCAGCAAAGATCATTGAAGAGGAGGAGCGAGTGGACATTCTAATCAACAACGCGGGTGTGATGCGGTGCCCCCACTGGA
CCACCGAGGACGGCTTCGAGATGCAGTTTGGCGTTAACCACCTGGGTCACTTTCTCTTGACAAACTTGCTGCTGGACAAG
CTGAAAGCCTCAGCCCCTTCGCGGATCATCAACCTCTCGTCCTTGGCCCATGTTGCTGGGCACATAGACTTTGATGACTT
GAACTGGCAGACGAGGAAGTATAACACCAAAGCCGCCTACTGCCAGAGCAAGCTGGCCATCGTCCTCTTCACCAAGGAGC
TGAGCCGGCGGCTGCAAGGCTCTGGTGTGACTGTCAACGCCCTGCACCCCGGCGTGGCCAGGACAGAGCTGGGCAGACAC
ACGGGCATCCATGGCTCCACCTTCTCCAGCACCACACTCGGACCCATCTTCTGGCTGCTGGTCAAGAGCCCCGAGCTGGC
CGCCCAGCCCAGCACATACCTGGCCGTGGCGGAGGAACTGGCGGATGTTTCCGGAAAGTACTTCGATGGACTCAAACAGA
AGGCCCCGGCCCCCGAGGCTGAGGATGAGGAGGTGGCCCAGAGGCTTTGGGCTGAAAGTGCCCGCCTGGTGGGCTTAGAG
GCTCCCTCTGTGAGGGAGCAGCCCCTCCCCAGATAA
ATGAGCCGCTACCTGCTGCCGCTGTCGGCGCTGGGCACGGTAGCAGGCGCCGCCGTGCTGCTCAAGGACTATGTCACCGG
TGGGGCTTGCCCCAGCAAGGCCACCATCCCTGGGAAGACGGTCATCGTGACGGGCGCCAACACAGGCATCGGGAAGCAGA
CCGCCTTGGAACTGGCCAGGAGAGGAGGCAACATCATCCTGGCCTGCCGAGACATGGAGAAGTGTGAGGCGGCAGCAAAG
GACATCCGCGGGGAGACCCTCAATCACCATGTCAACGCCCGGCACCTGGACTTGGCTTCCCTCAAGTCTATCCGAGAGTT
TGCAGCAAAGATCATTGAAGAGGAGGAGCGAGTGGACATTCTAATCAACAACGCGGGTGTGATGCGGTGCCCCCACTGGA
CCACCGAGGACGGCTTCGAGATGCAGTTTGGCGTTAACCACCTGGGTCACTTTCTCTTGACAAACTTGCTGCTGGACAAG
CTGAAAGCCTCAGCCCCTTCGCGGATCATCAACCTCTCGTCCTTGGCCCATGTTGCTGGGCACATAGACTTTGATGACTT
GAACTGGCAGACGAGGAAGTATAACACCAAAGCCGCCTACTGCCAGAGCAAGCTGGCCATCGTCCTCTTCACCAAGGAGC
TGAGCCGGCGGCTGCAAGGCTCTGGTGTGACTGTCAACGCCCTGCACCCCGGCGTGGCCAGGACAGAGCTGGGCAGACAC
ACGGGCATCCATGGCTCCACCTTCTCCAGCACCACACTCGGACCCATCTTCTGGCTGCTGGTCAAGAGCCCCGAGCTGGC
CGCCCAGCCCAGCACATACCTGGCCGTGGCGGAGGAACTGGCGGATGTTTCCGGAAAGTACTTCGATGGACTCAAACAGA
AGGCCCCGGCCCCCGAGGCTGAGGATGAGGAGGTGGCCCAGAGGCTTTGGGCTGAAAGTGCCCGCCTGGTGGGCTTAGAG
GCTCCCTCTGTGAGGGAGCAGCCCCTCCCCAGATAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 8 .60 RPM |
| SRP007412_cerebellum | 10 .43 RPM |
| SRP007412_heart | 8 .63 RPM |
| SRP007412_kidney | 17 .78 RPM |
| SRP007412_liver | 7 .17 RPM |
| SRP007412_testis | 5 .37 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000003306 | ortholog_one2one | 1 retrogene | |
| Equus caballus | ENSECAG00000023146 | ortholog_one2one | 1 retrogene | |
| Ochotona princeps | ENSOPRG00000015998 | ortholog_one2one | 2 retrogenes | |
| Petromyzon marinus | ENSPMAG00000009095 | ortholog_one2one | 1 retrogene | |
| Pongo abelii | ENSPPYG00000010398 | ortholog_one2one | 1 retrogene | |
| Sorex araneus | ENSSARG00000003600 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000016531 | ortholog_one2one | 1 retrogene | |
| Drosophila melanogaster | FBgn0033203 | ortholog_many2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ptro_1576 | 54.33 | 62.84 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPTRG00000011484 retrocopies