Parental gene:

RDH13, ENSSARG00000003600

Aliases:None
Description:retinol dehydrogenase 13 (all-trans/9-cis) [Source:HGNC Symbol;Acc:19978]
Organism:Shrew (Sorex araneus)
Coordinates:GeneScaffold_4709:670..49608(-)


>ENSSARG00000003600
ATGAACCGCTATCTTGTGCCGCTGTCCGTGCTGGGCTCCGCGGTAGGTGGTGCAGTTCTACTCAAGGACTATGTGGCAGG
TGGGGCGTGCCCCAGCAAGGCCACTATTCCTGGCAAGACCGTCATTGTCACAGGTGCCAACACGGGCATTGGCAAGCAGA
CAGCCCTGGAGCTGGCCAGGAGAGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNAGGAGGAGCACGTGCACGTTCTGATCAACAATGCTGCCGTGATGTGCTGTCCTCACTGGA
GCACGGAGGATGGCTTCGAGATGCAGTTTGGCGTGAACCATCTGGGTCCCTTTCTGTTGACAAACCTCCTTTTGGACAAG
CTCAAAGCATCAGCCCCGTCGCGCATCATCAACCTGTCGTCGCTGGCCCATATAGCCGGGCACATAGACTTTGAGGACCT
GAACTGGCAGCAGAGGAAGTTTGACACCAAAGCAGCTTATTGCCAGAGTAAGCTGGCCGTCGTCCTTTTCACCAAGGAGC
TCAGCCGGCGGCTGCAAGGCACGGGTGTGACTGTGAATGCTCTGCACCCTGGAGTGGCCAGGACGGAGCTGGGCAGACAC
ACTGGCTTGCACACATCCACCTTCTCGAGCCTAACACTTGGACCCATCTTTTGGCTGCTGGTCAAGAGCCCCCAGCTGGC
AGCCCAGCCCAGCACTTACTTGGCTGTAGCAGAGGAACTGGAAGGTGTTTCTGGAAAGTACTTTGATGGATTCAGAGAGA
AGTCTCCGGCTGCCAAGGCTGAGGATGAGGAGGTAGCCCAGAGGCTCTGGGCTGAAAGTGCCCGCTTGGTGGGATTGTCG
GTGAGAGCACAGCCTCACCCCAAGTAA

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000003306 ortholog_one2one 1 retrogene
retro_amel_114,
Equus caballus ENSECAG00000023146 ortholog_one2one 1 retrogene
retro_ecab_338,
Ochotona princeps ENSOPRG00000015998 ortholog_one2one 2 retrogenes
retro_opri_286, retro_opri_524,
Petromyzon marinus ENSPMAG00000009095 ortholog_one2one 1 retrogene
retro_pmar_3,
Pongo abelii ENSPPYG00000010398 ortholog_one2one 1 retrogene
retro_pabe_1972,
Pan troglodytes ENSPTRG00000011484 ortholog_one2one 1 retrogene
retro_ptro_1576,
Tupaia belangeri ENSTBEG00000016531 ortholog_one2one 1 retrogene
retro_tbel_1570,
Drosophila melanogaster FBgn0033203 ortholog_many2many 1 retrogene
retro_dmel_79,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_sara_314 54.63 62.50
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Download FASTA sequences of all ENSSARG00000003600 retrocopies