Parental gene:

RDH13, ENSAMEG00000003306

Aliases:None
Description:retinol dehydrogenase 13 (all-trans/9-cis) [Source:HGNC Symbol;Acc:19978]
Organism:Panda (Ailuropoda melanoleuca)
Coordinates:GL193426.1:177338..187684(-)


>ENSAMEG00000003306
ATGAACCGCTACCTCCTGCCGCTGTCCGTGCTGGGCACGGCGGTGGGCGGGTCGGCAGCCGTCAGAGACTACGTTGCGGG
CGGGGCCTGTCCCAGCAAGGCCACCATTCCTGGGAAGACCGTCATCGTGACTGGCGCCAACACGGGCATCGGGAAGCAGA
CGGCCTTGGAGCTGGCCAGAAGAGGAGGCAACATCATTCTGGCCTGCCGAGATATGGAGAAGTGTGAGGCAGCGGCAAAG
GACATTCGTGGGGAGACCCTTAATCACCGTGTCAGGGCCCGGCACCTGGACTTGGCCTCCCTCAAGTCCGTCCGAGAGTT
TGCAGCGAAGATCACTGAAGAGGAGGGCCAAGTACACATCCTGGTCAACAATGCGGCTGTGATGCGGTGCCCCCACTGGA
CCACCGAGGACGGCTTCGAGATGCAGTTTGGTGTTAACCACTTGGGTCACTTTCTTTTGACAAACTTGCTGCTGGACACA
CTGAAAGCCTCGGCCCCTTCACGGATCATCAACCTCTCGTCCTTGGCCCACGTTGCAGGACACATAGACTTTGATGACTT
GAACTGGGAAAAGAGGAAGTATGACACCAAAGCAGCGTATTGCCAGAGTAAGCTGGCCGTCATCCTCTTCACCAAGGAGC
TGAGCCGGCGGCTGCAGGGCACGGGTGTGACTGTCAATGCTCTGCACCCCGGTGTGGCCAGGACAGAGCTGGGCAGGCAC
ACGGGCATGCACAGCTCTGCCTTCTCCAGCTTCACACTCGGGCCCATCTTCTGGCTGCTGGTCAAGAGCCCCGAGCTGGC
AGCGCAGCCCAGCACATACCTGGCTGTGGCAGAGGAATTGGGGGGTGTTTCTGGAAAGTACTTCGATGGACTCAAAGAGA
AGCCTCCAGCCCCTGAAGCTGAGGATGAGGAGGTAGCCCAGAGACTTTGGGCTGAAAGTGCCCGCCTGGTGGGCTTGGAG
ATGTCCGGTGGTTCCTCTGTGAGGGGGCAGCCCCTCCCCAAATAA

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000008036 within_species_paralog 1 retrogene
retro_amel_673,
Equus caballus ENSECAG00000023146 ortholog_one2one 1 retrogene
retro_ecab_338,
Ochotona princeps ENSOPRG00000015998 ortholog_one2one 2 retrogenes
retro_opri_286, retro_opri_524,
Petromyzon marinus ENSPMAG00000009095 ortholog_one2one 1 retrogene
retro_pmar_3,
Pongo abelii ENSPPYG00000010398 ortholog_one2one 1 retrogene
retro_pabe_1972,
Pan troglodytes ENSPTRG00000011484 ortholog_one2one 1 retrogene
retro_ptro_1576,
Sorex araneus ENSSARG00000003600 ortholog_one2one 1 retrogene
retro_sara_314,
Tupaia belangeri ENSTBEG00000016531 ortholog_one2one 1 retrogene
retro_tbel_1570,
Drosophila melanogaster FBgn0033203 ortholog_many2many 1 retrogene
retro_dmel_79,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_amel_114 54.59 61.98
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Download FASTA sequences of all ENSAMEG00000003306 retrocopies