Parental gene: | TUBA1C, ENSPVAG00000004646 |
| Aliases: | None |
| Description: | tubulin, alpha 1c [Source:HGNC Symbol;Acc:20768] |
| Organism: | Megabat (Pteropus vampyrus) |
| Coordinates: | GeneScaffold_1815:270180..275940(+) |
>ENSPVAG00000004646
ATGCGTGAGTGCATCTCCATCCATGTTGGCCAGGCTGGTGTTCAGATTGGCAATGCCTGCTGGGAGCTCTACTGCCTGGA
ACATGGCATCCAGCCTGATGGCCAGATGCCAAGTGACAAAACCATTGGTGGGGGAGACGACTCCTTCAACACCTTCTTCA
GTGAGACAGGCGCTGGCAAGCATGTGCCCAGGGCAGTGTTTGTAGACCTGGAACCCACAGTCATTGATGAAGTTCGCACT
GGCACCTACCGCCAGCTCTTCCACCCCGAGCAGCTCATCACAGGCAAGGAAGATGCCGCCAATAACTATGCTCGCGGACA
CTACACCATTGGCAAGGAAATCATTGACCTTGTCTTGGACCGAATTCGGAAGCTGGCTGACCAGTGCACAGGTCTTCAGG
GCTTCTTGGTTTTCCATAGCTTTGGTGGGGGAACTGGTTCTGGGTTCACCTCCCTGCTGATGGAACGTCTCTCTGTCGAT
TATGGCAAGAAGTCCAAGCTGGAGTTCTCCATTTACCCAGCCCCCCAGGTTTCCACAGCTGTAGTTGAGCCCTACAACTC
CATCCTCACCACCCACACCACCCTGGAGCACTCCGATTGTGCCTTCATGGTTGACAACGAGGCCATCTATGACATCTGTC
GTAGAAACCTTGATATTGAGCGCCCAACCTACACTAACCTGAACCGCCTTATTAGCCAGATTGTGTCCTCCATCACTGCT
TCCCTGAGATTTGATGGAGCCCTGAATGTTGATCTGACAGAATTCCAGACCAACCTGGTACCCTATCCCCGCATCCACTT
CCCTCTGGCCACCTATGCCCCTGTCATCTCTGCTGAGAAAGCCTACCATGAACAGCTTACTGTAGCAGAGATCACCAATG
CGTGTTTTGAGCCAGCCAACCAGATGGTAAAATGTGACCCTCGCCACGGTAAATACATCGCTTTGCTGTTGTACCGTGAC
GTGTTCCAAGATGTCGCTGCAATGCACATCAGTCAGCGCAGCCAGTTTGTGACTTGCCCCACTGGCTTCAAAGTTGGCAT
TAATTACCAGCCCACTGTGGTGCTGGACCTAGCTAAAGTACAGCGAGCTGTGTGCATGCTGAGCAACACTACAGCTGTTG
CTGAGGCCTGGGCTCGCCTGGACCACAAGTTTCTGATGTATGCCAAACGTGCCTTTGTTCACTGGTACGTGGGTGAGGGC
ATGGAGGAAGGAGAGTTTTCTGAGGCTCGTGAGGACATGGCTGCCCTTGAGAAGGATTATGAAGAGGTTGGAGCAGATAG
TGCTGAGGGAGAGGATGAGGGTGAAGAGTATTAA
ATGCGTGAGTGCATCTCCATCCATGTTGGCCAGGCTGGTGTTCAGATTGGCAATGCCTGCTGGGAGCTCTACTGCCTGGA
ACATGGCATCCAGCCTGATGGCCAGATGCCAAGTGACAAAACCATTGGTGGGGGAGACGACTCCTTCAACACCTTCTTCA
GTGAGACAGGCGCTGGCAAGCATGTGCCCAGGGCAGTGTTTGTAGACCTGGAACCCACAGTCATTGATGAAGTTCGCACT
GGCACCTACCGCCAGCTCTTCCACCCCGAGCAGCTCATCACAGGCAAGGAAGATGCCGCCAATAACTATGCTCGCGGACA
CTACACCATTGGCAAGGAAATCATTGACCTTGTCTTGGACCGAATTCGGAAGCTGGCTGACCAGTGCACAGGTCTTCAGG
GCTTCTTGGTTTTCCATAGCTTTGGTGGGGGAACTGGTTCTGGGTTCACCTCCCTGCTGATGGAACGTCTCTCTGTCGAT
TATGGCAAGAAGTCCAAGCTGGAGTTCTCCATTTACCCAGCCCCCCAGGTTTCCACAGCTGTAGTTGAGCCCTACAACTC
CATCCTCACCACCCACACCACCCTGGAGCACTCCGATTGTGCCTTCATGGTTGACAACGAGGCCATCTATGACATCTGTC
GTAGAAACCTTGATATTGAGCGCCCAACCTACACTAACCTGAACCGCCTTATTAGCCAGATTGTGTCCTCCATCACTGCT
TCCCTGAGATTTGATGGAGCCCTGAATGTTGATCTGACAGAATTCCAGACCAACCTGGTACCCTATCCCCGCATCCACTT
CCCTCTGGCCACCTATGCCCCTGTCATCTCTGCTGAGAAAGCCTACCATGAACAGCTTACTGTAGCAGAGATCACCAATG
CGTGTTTTGAGCCAGCCAACCAGATGGTAAAATGTGACCCTCGCCACGGTAAATACATCGCTTTGCTGTTGTACCGTGAC
GTGTTCCAAGATGTCGCTGCAATGCACATCAGTCAGCGCAGCCAGTTTGTGACTTGCCCCACTGGCTTCAAAGTTGGCAT
TAATTACCAGCCCACTGTGGTGCTGGACCTAGCTAAAGTACAGCGAGCTGTGTGCATGCTGAGCAACACTACAGCTGTTG
CTGAGGCCTGGGCTCGCCTGGACCACAAGTTTCTGATGTATGCCAAACGTGCCTTTGTTCACTGGTACGTGGGTGAGGGC
ATGGAGGAAGGAGAGTTTTCTGAGGCTCGTGAGGACATGGCTGCCCTTGAGAAGGATTATGAAGAGGTTGGAGCAGATAG
TGCTGAGGGAGAGGATGAGGGTGAAGAGTATTAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000039992 | possible_ortholog | 1 retrogene | |
| Choloepus hoffmanni | ENSCHOG00000008444 | possible_ortholog | 2 retrogenes | |
| Felis catus | ENSFCAG00000024852 | possible_ortholog | 1 retrogene | |
| Felis catus | ENSFCAG00000028689 | possible_ortholog | 3 retrogenes | |
| Macropus eugenii | ENSMEUG00000010779 | possible_ortholog | 2 retrogenes | |
| Oryctolagus cuniculus | ENSOCUG00000028032 | ortholog_one2many | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000009435 | possible_ortholog | 1 retrogene | |
| Pteropus vampyrus | ENSPVAG00000004645 | within_species_paralog | 2 retrogenes | |
| Pteropus vampyrus | ENSPVAG00000010798 | within_species_paralog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pvam_929 | 72.22 | 60.87 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPVAG00000004646 retrocopies