Parental gene:

ZC3H15, ENSSARG00000012071

Aliases:None
Description:zinc finger CCCH-type containing 15 [Source:HGNC Symbol;Acc:29528]
Organism:Shrew (Sorex araneus)
Coordinates:scaffold_231908:45266..54192(+)


>ENSSARG00000012071
GTAGCACAAAGTGAAGCCGAAAAGAAATTGAAGAAAGATGATAAGAAGAAAGAATTACAAGAACTAAATGAACTGTTCAA
GCCAGTAGTTGCTGCTCAAAAAATAAGTAAAGGTGCAGATCCTAAATCTGTAGTATGTGCATTCTTCAAGCAAGGACAGT
GTACTAAAGGAGATAAGTGTAAGTTCTCTCATGACTTAACTCTGGAGAGAAAGTGTGAAAAGCGAAGTGTTTATATTGAT
GCAAGAGATGAAGAACTTGAAAAAGATACAATGGATAATTGGGACGAGAAAAAATTAGAAGAAGTAGTGAACAAGAAGCA
CGGTGAGGCGGAAAAGAAAAAACCAAAAACTCAAATAGTTTGCAAGCATTTCCTTGAAGCTATTGAAAATAACAAATATG
GCTGGTTTTGGGTATGCCCAGGAGGGGGTGATAATTGCATGTATCGTCATGCACTTCCTCCAGGATTTGTATTAAAAAAG
GATAAAAAGAAAGAAGAGAAAGAAGATGAAATTTCATTAGAAGATCTAATTGAAAGAGAGCGTTCTGCCCTAGGACCAAA
TGTTACCAAAATCACTCTAGAATCTTTTCTTGCCTGGAAGAAAAGAAAACGACAAGAAAAGATTGATAAACTTGAGCAAG
ATATGGAAAGAAGGAAAGCGGACTTCAAAGCAGGAAAAGCTCTGGTGATCAGTGGTCGTGAAGTATTTGAATTTCGTCCT
GAACTGGTTAATGATGATGACGAGGAAGCAGATGATACTCGTTACACCCAGGGAGCGGGTGGTGATGAGGTTGAAGATTC
AGTGAACGTAAATGACATAGATTTAAGCCTGTATATACCAAGAGATGTGGATGAGACGGGTATTACTGTAGCGAGTCTTG
AAAGATTTAGCACATACACTTCAGAAAAGGATGAAAACAAATTAAGTGAAGCATCTGGTGGCAGGGCTGAAAATGGTGAA
AGAAGTGACTTAGAAGAGGACAACGAAGGGGAGGGACAGGAAAATGGAGCTATCGATGCTGTTCCTGTTGATGAAAACCT
TTTTACTGGAGAAGATTTGGATGAACTAGAAGAAGAATTAAACACACTTGACTTAGAAGAATGA

Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000021762 ortholog_one2one 1 retrogene
retro_btau_1223,
Choloepus hoffmanni ENSCHOG00000011958 ortholog_one2one 1 retrogene
retro_chof_2120,
Callithrix jacchus ENSCJAG00000005931 ortholog_one2one 2 retrogenes
retro_cjac_2883, retro_cjac_3986,
Cavia porcellus ENSCPOG00000012965 ortholog_one2one 2 retrogenes
retro_cpor_1294, retro_cpor_919,
Dipodomys ordii ENSDORG00000011664 ortholog_one2one 1 retrogene
retro_dord_666,
Loxodonta africana ENSLAFG00000001563 possible_ortholog 1 retrogene
retro_lafr_941,
Monodelphis domestica ENSMODG00000027565 ortholog_one2many 5 retrogenes
retro_mdom_1230, retro_mdom_1321, retro_mdom_1744, retro_mdom_1942, retro_mdom_871,
Oryctolagus cuniculus ENSOCUG00000011903 ortholog_one2one 1 retrogene
retro_ocun_886,
Otolemur garnettii ENSOGAG00000002182 ortholog_one2one 2 retrogenes
retro_ogar_1093, retro_ogar_611,
Ochotona princeps ENSOPRG00000015790 ortholog_one2many 2 retrogenes
retro_opri_169, retro_opri_609,
Pan troglodytes ENSPTRG00000012717 ortholog_one2one 1 retrogene
retro_ptro_348,
Rattus norvegicus ENSRNOG00000005256 ortholog_one2many 4 retrogenes
retro_rnor_2628, retro_rnor_284, retro_rnor_662, retro_rnor_925,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_sara_363 96.79 50.95
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Download FASTA sequences of all ENSSARG00000012071 retrocopies