Parental gene:

ENSLAFG00000001563

Aliases:None
Description:None
Organism:Elephant (Loxodonta africana)
Coordinates:scaffold_3:40743054..40767230(-)


>ENSLAFG00000001563
ATGCCCCCCAAGAAACAGGCTCAGGCCGGGGGCAGCAAAAAGGCGGAGCAGAAAAAGAAGGAGAAGATCATCGAAGACAA
AACTTTTGGTCTAAAGAATAAGAAAGGAGCAAAGCAACAGAAGTTTATCAAGGCTGTCACTCATCAAGTTAAATTTGGTC
AACAAAATCCACGTCAGGTAGCACAAAGTGAAGCTGAAAAGAAATTGAAGAAGGATGACAAGAAGAAGGAATTGCAGGAG
CTAAATGAACTATTCAAACCTGTAGTTGCTGCTCAAAAAATAAGTAAAGGTGCAGATCCCAAGTCCGTGGTATGTGCATT
CTTCAAGCAAGGACAGTGTTCTAAAGGAGATAAGTGTAAGTTCTCTCATGACTTGACTCTGGAGAGAAAATGTGAAAAGC
GAAGTGTTTACATTGACGCAAGAGATGAAGAACTTGAAAAAGATACCATGGATAATTGGGATGAAAAAAAACTGGAAGAA
GTAGTGAACAAGAAGCACGGTGAGGCGGAAAAGAAAAAACCAAAAACTCAAATAGTATGCAAGCATTTCCTTGAAGCTAT
TGAAAACAACAAGTATGGCTGGTTTTGGGTATGCCCTGGAGGGGGTGATATGTGCATGTATCGTCATGCACTTCCTCCTG
GATTTGTGTTGAAAAAAGATAAAAAGAAAGAAGAGAAAGAAGACGAAATTTCATTAGAAGACCTCATTGAAAGAGAGCGT
TCTGCCCTAGGTCCAAATGTTACCAAAATCACTCTAGAATCTTTTCTTGCATGGAAAAAAAGGAAAAGACAAGAAAAGAT
TGATAAACTTGAGCAAGATATGGAAAGAAGGAAAGCAGACTTCAAAGCAGGGAAAGCACTAGTGATCAGTGGTCGTGAGG
TGTTTGAATTTCGTCCTGAACTGGTCGATGATGATGATGAGGAAGCAGATGATACCCGTTACACGCAGGGAACAGGTGGT
GATGAGGTTGATGATTCTGTGAGCATAAATGACATAGATTTAAGCCTGTACATTCCAAGAGATGTAGATGAGACAGGTAT
TACTGTAGCCAGTCTTGAAAGATTCAGCACGTACACTTCAGAAAAAGATGAAAACAAATTAAGTGAAGCTTCTGGAGGTA
GGGCTGAAAATGGGGAAAGGAGTGACCTGGAAGAGGACAACGAAGGGGAGGAACAGGAAAATGGAGCCATCGACGCTGTT
CCTGTTGATGAAAACCTTTTCACTGGGGAAGATTTGGATGAACTAGAAGAAGAATTAAACACACTTGATTTAGAAGAATG
A

Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000021762 possible_ortholog 1 retrogene
retro_btau_1223,
Choloepus hoffmanni ENSCHOG00000011958 possible_ortholog 1 retrogene
retro_chof_2120,
Callithrix jacchus ENSCJAG00000005931 possible_ortholog 2 retrogenes
retro_cjac_2883, retro_cjac_3986,
Cavia porcellus ENSCPOG00000012965 possible_ortholog 2 retrogenes
retro_cpor_1294, retro_cpor_919,
Dipodomys ordii ENSDORG00000011664 possible_ortholog 1 retrogene
retro_dord_666,
Myotis lucifugus ENSMLUG00000007741 ortholog_one2many 2 retrogenes
retro_mluc_1494, retro_mluc_2467,
Monodelphis domestica ENSMODG00000027565 ortholog_many2many 5 retrogenes
retro_mdom_1230, retro_mdom_1321, retro_mdom_1744, retro_mdom_1942, retro_mdom_871,
Oryctolagus cuniculus ENSOCUG00000011903 possible_ortholog 1 retrogene
retro_ocun_886,
Otolemur garnettii ENSOGAG00000002182 possible_ortholog 2 retrogenes
retro_ogar_1093, retro_ogar_611,
Ochotona princeps ENSOPRG00000015790 possible_ortholog 2 retrogenes
retro_opri_169, retro_opri_609,
Pan troglodytes ENSPTRG00000012717 possible_ortholog 1 retrogene
retro_ptro_348,
Rattus norvegicus ENSRNOG00000005256 possible_ortholog 4 retrogenes
retro_rnor_2628, retro_rnor_284, retro_rnor_662, retro_rnor_925,
Sorex araneus ENSSARG00000012071 possible_ortholog 1 retrogene
retro_sara_363,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_lafr_941 98.59 100.00
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Download FASTA sequences of all ENSLAFG00000001563 retrocopies