Parental gene:

ENSSHAG00000005522

Aliases:None
Description:None
Organism:Tasmanian devil (Sarcophilus harrisii)
Coordinates:GL849792.1:163908..171128(+)


>ENSSHAG00000005522
ATGTCTATCCTCAGGGTCTACGCCAGAGAAATCTTCGACTCTCGTGGAAACCCCACTGTTGAAGTTGATGTCTACACTGG
AAAAGGTCTCTTTCGAGCTGCTGTGCCCAGTGGTGCTTCCACCGGTGTCCATGAAGCCCTGGAACTCCGGGACAATGATA
AGACCCACTATATGGGGAAAGGTGTCTCAAAAGCGGTTGAGCACATCAATAAAACTATTGCCCCAAGCCTGATTAGCAAG
AAACTGAATGTTGTGGAACAGGAGAAAATCGATAAGTTGATGATAGAGATGGATGGCTCCGAAAATAAATCTAAATTTGG
TGCAAATGCTATATTGGGAGTGTCTCTGGCTGTTTGTAAGGCTGGAGCTGCTGAGAAAGGTGTCTCCCTGTATCGCCATA
TTGCTGACCTTGCAGGCAATAGTGAAGTCATCCTTCCAGTTCCAGCCTTCAATGTGATCAATGGTGGCTCCCATGCTGGT
AACAAGCTGGCCATGCAGGAGTTCATGATCCTCCCTGTTGGAGCAACAACTTTCAAGGAGGCCATGCGCATTGGGGCTGA
GGTCTACCACAACTTGAAGAACGTGATTAAGCAGAAATATGGACAGGATGCCACTAACGTAGGGGATGAGGGTGGCTTTG
CTCCTAACATCCTAGAGAATAAAGAAGCTCTGGAGCTGCTGAAAGAAGCCATTGGTAAAGCTGGTTATACTGATAAGGTT
GTGATTGGCATGGACGTGGCTGCCTCAGAATTCTTCTGCTCTGGGAAATATGACTTAGACTTCAAGTCTCCTGATGATCC
CAGCCGATACATCTCTCCTTCTGAGCTCGGGGACCTCTACAAGACCTTCATCAAGGACTATCCAGTGGTGTCTATTGAAG
ATCCCTTTGACCAGGATGATTGGGAGGCTTGGAAGGATTTCACTGCTACTGCAGGCATCCAGGTGGTAGGGGATGGTCTC
ACAGTGACCAATCCCAAGCGCATTGAAAAGGCTGTGAATGAGAAAGCCTGCAACTGCCTCCTCCTCAAAGTGAACCAGAT
TGGCTCTGTGACCGAATCTCTCCAGGCGTGCAAGCTGGCCCAGTCCAATGGGTGGGGAGTAATGGTTTCTCATCGTTCTG
GAGAGACTGAAGACACCTTCATTGCAGATCTGGTGGTGGGTCTCTGCACTGGGCAGATCAAGACTGGTGCCCTTTGCCGA
TCTGAGCGTCTAGCAAAGTATAACCAGATTCTTAGAATCGAGGAAGAGCTGGGCAGCAAGGCTAGGTTTGCCGGAAGGAA
CTTCAGGAATCCTCAGGCCAACTAA

Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000003483 possible_ortholog 2 retrogenes
retro_chof_1289, retro_chof_1811,
Callithrix jacchus ENSCJAG00000000359 possible_ortholog 4 retrogenes
retro_cjac_1963, retro_cjac_2238, retro_cjac_3891, retro_cjac_438,
Erinaceus europaeus ENSEEUG00000008602 ortholog_one2many 2 retrogenes
retro_eeur_23, retro_eeur_243,
Homo sapiens ENSG00000074800 possible_ortholog 1 retrogene
retro_hsap_325,
Macropus eugenii ENSMEUG00000005942 ortholog_one2many 11 retrogenes
retro_meug_1445, retro_meug_1521, retro_meug_353, retro_meug_472, retro_meug_494, retro_meug_652, retro_meug_664, retro_meug_765, retro_meug_794, retro_meug_874, retro_meug_888,
Macropus eugenii ENSMEUG00000007840 possible_ortholog 1 retrogene
retro_meug_96,
Monodelphis domestica ENSMODG00000009521 ortholog_one2many 1 retrogene
retro_mdom_1794,
Mustela putorius furo ENSMPUG00000006382 possible_ortholog 2 retrogenes
retro_mputfur_1162, retro_mputfur_547,
Mus musculus ENSMUSG00000063524 possible_ortholog 1 retrogene
retro_mmus_109,
Oryctolagus cuniculus ENSOCUG00000010086 possible_ortholog 1 retrogene
retro_ocun_933,
Otolemur garnettii ENSOGAG00000004001 possible_ortholog 1 retrogene
retro_ogar_1059,
Ochotona princeps ENSOPRG00000009492 possible_ortholog 1 retrogene
retro_opri_969,
Pan troglodytes ENSPTRG00000000109 possible_ortholog 1 retrogene
retro_ptro_261,
Pteropus vampyrus ENSPVAG00000005030 possible_ortholog 1 retrogene
retro_pvam_317,
Rattus norvegicus ENSRNOG00000017895 possible_ortholog 1 retrogene
retro_rnor_112,
Tarsius syrichta ENSTSYG00000002509 possible_ortholog 1 retrogene
retro_tsyr_2011,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_shar_304 65.55 74.88
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Download FASTA sequences of all ENSSHAG00000005522 retrocopies