Parental gene:

NDUFAB1, ENSSSCG00000010795

Aliases:None
Description:NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1, 8kDa [Source:HGNC Symbol;Acc:7694]
Organism:Pig (Sus scrofa)
Coordinates:10:50588..62614(+)


>ENSSSCG00000010795
ATGGCGGCTCGTGTCCTCTGCGCCTGTGTCCGCCGCCTGCCCGCGGCCTTTGCACCGCTGCCCAGGATTCCCACGGTGGT
CGCAGCTCGGCCGCTCAGCACCACCCTGTTCCCCACGGGAGCCCAGGCGAGGTCTAGGGCCCTGCAGCCGGCCTTGGTGC
TCGCGCAGGCTCCCGGCGGAGTCACACAGATGTGTCGCCGGTATAGTGACGCGCCCCCTCTGACATTAGAGGCGATCAAG
GACCGTGTCCTTTACGTCTTGAAACTCTATGACAAGATCGATCCCGAAAAGCTCTCAGTAAATTCCCACTTTATGAAAGA
CCTGGGCTTAGACAGTTTGGACCAAGTGGAGATTATCATGGCCATGGAGGACGAATTTGGGTTTGAAATTCCTGATATAG
ATGCGGAGAAGTTAATGTGCCCACAAGAAATTGTAGATTACATTGCAGATAAGAAGGATGTCTATGAATAA

Library Parental gene expression (RPM)
SRP014902_placenta 21 .10 RPM
SRP014902_testis 31 .68 RPM
SRP018288_heart 159 .34 RPM
SRP018288_kidney 106 .39 RPM
SRP018288_liver 55 .97 RPM
SRP018288_lung 36 .45 RPM
SRP018856_adipose 24 .65 RPM
SRP035408_brain 136 .70 RPM
SRP035408_liver 105 .01 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000014304 possible_ortholog 1 retrogene
retro_amel_1692,
Canis familiaris ENSCAFG00000017667 ortholog_one2many 3 retrogenes
retro_cfam_1738, retro_cfam_1821, retro_cfam_450,
Choloepus hoffmanni ENSCHOG00000003558 ortholog_one2one 2 retrogenes
retro_chof_1517, retro_chof_2498,
Callithrix jacchus ENSCJAG00000020616 possible_ortholog 2 retrogenes
retro_cjac_2635, retro_cjac_3099,
Cavia porcellus ENSCPOG00000012038 ortholog_one2one 2 retrogenes
retro_cpor_728, retro_cpor_767,
Dasypus novemcinctus ENSDNOG00000017122 ortholog_one2one 5 retrogenes
retro_dnov_1450, retro_dnov_1733, retro_dnov_2024, retro_dnov_89, retro_dnov_911,
Felis catus ENSFCAG00000013241 ortholog_one2many 3 retrogenes
retro_fcat_1104, retro_fcat_1181, retro_fcat_2012,
Loxodonta africana ENSLAFG00000001032 ortholog_one2one 1 retrogene
retro_lafr_330,
Macropus eugenii ENSMEUG00000012681 ortholog_one2one 3 retrogenes
retro_meug_1780, retro_meug_303, retro_meug_830,
Macaca mulatta ENSMMUG00000020522 possible_ortholog 1 retrogene
retro_mmul_101,
Monodelphis domestica ENSMODG00000016352 ortholog_one2one 1 retrogene
retro_mdom_389,
Mus musculus ENSMUSG00000030869 ortholog_one2one 6 retrogenes
retro_mmus_1724, retro_mmus_2073, retro_mmus_2188, retro_mmus_2947, retro_mmus_3094, retro_mmus_3332,
Otolemur garnettii ENSOGAG00000005562 possible_ortholog 2 retrogenes
retro_ogar_2916, retro_ogar_325,
Rattus norvegicus ENSRNOG00000018129 ortholog_one2many 2 retrogenes
retro_rnor_1353, retro_rnor_2058,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_sscr_1017 70.27 70.51
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Download FASTA sequences of all ENSSSCG00000010795 retrocopies