Parental gene:

HNRNPH3, ENSSTOG00000011676

Aliases:None
Description:heterogeneous nuclear ribonucleoprotein H3 (2H9) [Source:HGNC Symbol;Acc:5043]
Organism:Squirrel (Ictidomys tridecemlineatus)
Coordinates:JH393331.1:9935133..9940088(-)


>ENSSTOG00000011676
TCTGGTAATAGAATTATGCAGGCATTTAAATCAAACGGTATTGAGATGGATTGGGTTATGAAACATAATGGTCCAAATGA
CGCTAGTGATGGGACAGTACGACTACGTGGACTGCCATTTGGTTGCAGCAAAGAGGAAATAGTTCAGTTCTTTCAAGGGT
TGGAAATCGTGCCAAATGGGATAACATTGACGATGGACTACCAGGGGAGAAGCACAGGGGAGGCCTTCGTGCAGTTTGCT
TCAAAGGAGATAGCAGAAAATGCTCTGGGGAAACACAAGGAAAGAATAGGGCACAGGTATATTGAGATCTTCAGAAGTAG
CAGGAGTGAAATCAAAGGATTTTATGACCCACCAAGAAGATTGCTGGGACAGCGACCGGGACCATATGATAGACCAATAG
GAGGAAGAGGTGGTTATTATGGAGCTGGGCGTGGAAGTATGTATGACAGAATGCGACGAGGAGGTGATGGATATGATGGT
GGCTATGGAGGTTTTGATGACTATGGTGGCTATAATAATTATGGCTATGGAAATGATGGCTTTGATGACAGAATGAGAGA
TGGAAGAGGTATGGGAGGTCATGGCTATGGTGGAGCTGGTGATGCAAGTTCAGGTTTTCATGGTGGTCATTTTGTACATA
TGAGAGGGTTGCCTTTTCGTGCAACTGAAAATGATATTGCTAATTTCTTCTCGCCACTAAATCCAATTCGAGTTCATATT
GATATTGGAGCTGATGGCAGAGCAACAGGAGAAGCAGATGTAGAGTTTGTGACACATGAAGATGCAGTAGCTGCCATGTC
TAAAGATAAAAATAACATGCAACATCGGTACATTGAACTCTTCTTGAATTCTACCCCTGGAGGTGGCTCTGGAATGGGAG
GTTCTGGAATGGGAGGCTACGGCAGAGATGGAATGGATAATCAGGGAGGATATGGATCTGTTGGAAGAATGGGAATGGGG
AACAATTATAGTGGAGGATATGGTACTCCTGATGGCTTGGGTGGTTATGATATACTAGTTACTCCTAAAGATGTGCTGCC
TTCATAA

Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000010365 ortholog_one2one 1 retrogene
retro_acar_184,
Bos taurus ENSBTAG00000014316 possible_ortholog 2 retrogenes
retro_btau_1504, retro_btau_470,
Callithrix jacchus ENSCJAG00000019154 possible_ortholog 2 retrogenes
retro_cjac_292, retro_cjac_578,
Gallus gallus ENSGALG00000003947 ortholog_one2one 1 retrogene
retro_ggal_16,
Macropus eugenii ENSMEUG00000013139 ortholog_one2one 1 retrogene
retro_meug_1627,
Ictidomys tridecemlineatus ENSSTOG00000011569 within_species_paralog 2 retrogenes
retro_itri_1828, retro_itri_523,
Ictidomys tridecemlineatus ENSSTOG00000016376 within_species_paralog 2 retrogenes
retro_itri_66, retro_itri_78,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_itri_647 76.22 52.30
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Download FASTA sequences of all ENSSTOG00000011676 retrocopies