Parental gene:

HNRNPH3, ENSACAG00000010365

Aliases:None
Description:None
Organism:Anole lizard (Anolis carolinensis)
Coordinates:GL343215.1:1485371..1492946(-)


>ENSACAG00000010365
ATGGACTGGGCTGGGAAACATAATGGTCCAAATGATTCATCTAGTGATGGAACAGTACGATTGCGTGGTCTGCCATTTGG
CTGCAGCAAGGAGGAGATCGTTCAGTTCTTTCAAGGGTTGGAAATCGTGCCAAATGGGATAACATTGACGCTGGACTACC
AGGGGAGAAGCACAGGGGAGGCCTTCGTGCAGTTTGCTTCAAAGGAGATAGCAGAAAAAGCTCTGGGGAAACACAAGGAA
AGAATAGGGCACAGATATATTGAGATCTTCAAAAGTAGTAAGAGTGAAATCCGAGGATTCTATGATCCACCACGAAGAAT
GATGGGACAGCGACCTGGACCATATGATAGACCAATGGGAGGAAGAGGGGGTTATTATGGAGCTGGGCGTGGAAGTATGT
ATGACAGAATGCATCGAGGAGGTGGTGGATATGACGGTGGGTATGGTGGCTTTGATGAGTATGGTGGCTATAACAATTAT
GGCTATGGAAATGATGGCTATGATGACAGAATGAGAGATGGGAGAGGAATGGGAGGCCATGGGTATGGTGGAGCAGGAGA
TGCCAGCTCAGGCTTTCAAGGCGGTCATTTTGTTCACATGAGGGGATTGCCATTTCGAGCTACAGAAAATGACATAGCTA
ATTTTTTTTCACCACTGACCCCTATAAGAGTTCATATTGACATTGGAGCAGACGGTAGAGCAACAGGCGAAGCTGATGTA
GAATTTGTGACACACGAAGATGCAGTGGCTGCCATGTCAAAGGATAAAAATCATATGCAACATCGATACATTGAGTTGTT
CCTGAATTCAACTGCTGGAGGCGGTGCTGGCATGGGAGGCTATGGCAGAGATGGCATGGATCAAGGTGGTTATGGTTCCG
TAGGAAGAATGGGAATGGGCAGCAGTTACAGTGGAGGATATGGTACTCCCGATGGATTAGGTGGCTATGGTCGTGGCAGT
GGAAATAGTGGTGGATACTATGGTCAAGGCAACATGGGAGGAGCTGGATGGCGTGGAATGTAT

Library Parental gene expression (RPM)
SRP009831_adrenal 129 .42 RPM
SRP009831_brain 89 .66 RPM
SRP009831_dewlap 73 .66 RPM
SRP009831_embryo 305 .90 RPM
SRP009831_heart 149 .32 RPM
SRP009831_liver 44 .05 RPM
SRP009831_lung 96 .26 RPM
SRP009831_ovary 69 .15 RPM
SRP009831_skeletal_muscle 20 .98 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000018064 ortholog_one2one 1 retrogene
retro_amel_1375,
Bos taurus ENSBTAG00000014316 ortholog_one2many 2 retrogenes
retro_btau_1504, retro_btau_470,
Callithrix jacchus ENSCJAG00000019154 ortholog_one2many 2 retrogenes
retro_cjac_292, retro_cjac_578,
Equus caballus ENSECAG00000007190 ortholog_one2one 1 retrogene
retro_ecab_912,
Gallus gallus ENSGALG00000003947 ortholog_one2one 1 retrogene
retro_ggal_16,
Macropus eugenii ENSMEUG00000013139 ortholog_one2one 1 retrogene
retro_meug_1627,
Mustela putorius furo ENSMPUG00000011997 ortholog_one2one 1 retrogene
retro_mputfur_1469,
Oryctolagus cuniculus ENSOCUG00000004443 ortholog_one2one 3 retrogenes
retro_ocun_1136, retro_ocun_1379, retro_ocun_1615,
Ictidomys tridecemlineatus ENSSTOG00000011676 ortholog_one2one 1 retrogene
retro_itri_647,
Tursiops truncatus ENSTTRG00000013322 ortholog_one2one 2 retrogenes
retro_ttru_1744, retro_ttru_1766,
Vicugna pacos ENSVPAG00000011814 ortholog_one2one 1 retrogene
retro_vpac_403,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_acar_184 97.45 57.48
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Download FASTA sequences of all ENSACAG00000010365 retrocopies