Parental gene: | HNRNPH1, ENSSTOG00000016376 |
| Aliases: | None |
| Description: | heterogeneous nuclear ribonucleoprotein H1 (H) [Source:HGNC Symbol;Acc:5041] |
| Organism: | Squirrel (Ictidomys tridecemlineatus) |
| Coordinates: | JH393549.1:1135833..1144072(+) |
>ENSSTOG00000016376
ATGATGTTGGGCACCGAAGGTGGAGAAGGATTCGTGGTTAAGGTCCGGGGCTTGCCCTGGTCTTGCTCGGCCGATGAAGT
GCAACGTTTTTTTTCCGACTGCAAAATTCAAAATGGGGCTCAAGGTATTCGTTTCATCTACACCAGAGAAGGCAGACCGA
GTGGCGAGGCTTTTGTTGAACTTGAATCAGAAGATGAAGTCAAATTGGCCCTGAAAAAAGACAGAGAAACTATGGGACAC
AGATATGTTGAAGTATTCAAGTCAAACAACGTTGAAATGGATTGGGTGTTGAAGCATACTGGTCCAAATAGTCCTGACAC
GGCCAATGATGGCTTTGTACGGCTTAGAGGACTCCCCTTTGGATGTAGCAAGGAAGAAATTGTTCAGTTCTTCTCAGGGT
TGGAAATCGTGCCAAATGGGATAACATTGCCGGTGGACTTCCAGGGGAGGAGTACGGGGGAGGCCTTCGTGCAGTTTGCT
TCACAGGAAATAGCTGAAAAGGCTCTAAAGAAACACAAGGAAAGAATAGGGCACAGGTATATCGAAATATTTAAGAGCAG
TCGAGCTGAAGTTAGAACTCATTATGATCCGCCAAGAAAGCTTATGGCCATGCAGCGGCCAGGTCCCTATGACAGACCTG
GGGCTGGCAGAGGGTATAACAGCATTGGCAGAGGAGCTGGCTTTGAGAGGATGAGGCGTGGTGCTTATGGTGGAGGCTAT
GGAGGCTATGATGATTATAATGGCTATAATGATGGCTATGGATTTGGGTCAGATAGATTTGGAAGAGACCTCAATTACTG
TTTTTCAGGAATGTCTGATCACAGATATGGGGATGGTGGTTCTACCTTCCAGAGCACAACAGGGCATTGTGTACACATGC
GGGGATTACCTTACAGAGCTACTGAGAATGACATTTATAATTTTTTTTCACCACTCAATCCTGTGAGAGTACACATTGAG
ATTGGTCCTGATGGCAGAGTAACTGGTGAAGCAGATGTTGAGTTTGCTACTCATGAAGATGCTGTGGCAGCTATGTCAAA
AGACAAAGCAAATATGCAACACAGATATGTAGAACTCTTCTTGAATTCTACAGCAGGAGCAAGCGGTGGTGCTTACGAAC
ACAGATATGTAGAACTCTTCTTGAATTCTACAGCAGGAGCAAGCGGTGGTGCTTATGGTAGCCAAATGATGGGAGGCATG
GGCTTGTCAAACCAGTCCAGTTATGGTGGCCCAGCTAGCCAGCAGCTGAGTGGTGGTTATGGAGGAGGCTATGGAGGCCA
GAGCAGCATGAGTGGATATGGTAGCCAAGGAGCAATGAACAGCAGCTACTACAATAGTGGAAGCCGTGCATCTATGGGCG
TGAACGGAATGGGAGGGATGTCTAGCATGTCCAGTATGAGTGGTGGATGGGGAATGTAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000009389 | ortholog_one2one | 1 retrogene | |
| Canis familiaris | ENSCAFG00000000336 | ortholog_one2one | 2 retrogenes | |
| Choloepus hoffmanni | ENSCHOG00000003841 | possible_ortholog | 4 retrogenes | |
| Callithrix jacchus | ENSCJAG00000009931 | possible_ortholog | 1 retrogene | |
| Dipodomys ordii | ENSDORG00000005453 | ortholog_one2one | 1 retrogene | |
| Equus caballus | ENSECAG00000014429 | possible_ortholog | 1 retrogene | |
| Echinops telfairi | ENSETEG00000011303 | possible_ortholog | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000025844 | ortholog_one2one | 2 retrogenes | |
| Myotis lucifugus | ENSMLUG00000016625 | possible_ortholog | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000010843 | possible_ortholog | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000009436 | possible_ortholog | 3 retrogenes | |
| Mustela putorius furo | ENSMPUG00000000693 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000007850 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000026658 | ortholog_one2one | 3 retrogenes | |
| Ochotona princeps | ENSOPRG00000003513 | possible_ortholog | 1 retrogene | |
| Procavia capensis | ENSPCAG00000006715 | possible_ortholog | 1 retrogene | |
| Pteropus vampyrus | ENSPVAG00000007670 | possible_ortholog | 1 retrogene | |
| Sorex araneus | ENSSARG00000003024 | possible_ortholog | 1 retrogene | |
| Sarcophilus harrisii | ENSSHAG00000018204 | possible_ortholog | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000011569 | within_species_paralog | 2 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000011676 | within_species_paralog | 1 retrogene | |
| Vicugna pacos | ENSVPAG00000007485 | possible_ortholog | 2 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_itri_66 | 75.30 | 86.86 | Please wait, loading  |
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| 2. | retro_itri_78 | 95.07 | 94.49 | Please wait, loading |
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Download FASTA sequences of all ENSSTOG00000016376 retrocopies