Parental gene:

UBE2L3, ENSSTOG00000016293

Aliases:None
Description:ubiquitin-conjugating enzyme E2L 3 [Source:HGNC Symbol;Acc:12488]
Organism:Squirrel (Ictidomys tridecemlineatus)
Coordinates:JH393429.1:2072902..2137325(-)


>ENSSTOG00000016293
ATGAAAAACTTCCGTAACATCCAGGTTGATGAAGCTAATTTATTGACTTGGCAAGGGCTTATTGTTCCTGACAACCCTCC
ATATGATAAGGGGGCCTTCAGAATCGAAATCAACTTTCCAGCAGAATACCCATTCAAACCACCGAAGATCACATTTAAAA
CAAAGATCTACCACCCAAACATTGATGAAAAAGGGCAGGTCTGCCTGCCAGTAATTAGTGCTGAGAACTGGAAGCCAGCA
ACCAAGACCGACCAAGTAATCCAGTCCCTCATAGCACTGGTGAACGACCCCCAGCCCGAGCACCCGCTCCGGGCTGACCT
AGCTGAAGAATACTCTAAGGACCGTAAAAAATTCTGTAAGAACGCTGAAGAGTTTACAAAGAAATATGGGGAAAAGCGAC
CTGTGGACTAA

Species Parental gene accession Homology type Retrogenes number
Equus caballus ENSECAG00000019274 ortholog_one2one 1 retrogene
retro_ecab_116,
Homo sapiens ENSG00000185651 ortholog_one2one 4 retrogenes
retro_hsap_1094, retro_hsap_1185, retro_hsap_1338, retro_hsap_1960,
Myotis lucifugus ENSMLUG00000001547 ortholog_one2one 1 retrogene
retro_mluc_32,
Nomascus leucogenys ENSNLEG00000000192 possible_ortholog 1 retrogene
retro_nleu_97,
Oryctolagus cuniculus ENSOCUG00000002610 ortholog_one2one 3 retrogenes
retro_ocun_826, retro_ocun_932, retro_ocun_937,
Pongo abelii ENSPPYG00000011602 possible_ortholog 1 retrogene
retro_pabe_99,
Pan troglodytes ENSPTRG00000014114 possible_ortholog 1 retrogene
retro_ptro_123,
Pteropus vampyrus ENSPVAG00000013575 ortholog_one2one 1 retrogene
retro_pvam_727,
Sorex araneus ENSSARG00000005137 ortholog_one2one 3 retrogenes
retro_sara_105, retro_sara_277, retro_sara_653,
Ictidomys tridecemlineatus ENSSTOG00000013481 within_species_paralog 6 retrogenes
retro_itri_1222, retro_itri_1474, retro_itri_1628, retro_itri_463, retro_itri_672, retro_itri_998,
Ictidomys tridecemlineatus ENSSTOG00000025799 other_paralog 2 retrogenes
retro_itri_1371, retro_itri_645,
Tetraodon nigroviridis ENSTNIG00000010600 ortholog_one2many 1 retrogene
retro_tnig_16,
Takifugu rubripes ENSTRUG00000003392 ortholog_one2one 1 retrogene
retro_trub_39,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_itri_655 72.26 100.00
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2. retro_itri_1528 77.54 100.00
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Download FASTA sequences of all ENSSTOG00000016293 retrocopies