Parental gene: | UBE2L3, ENSG00000185651 |
| Aliases: | UBE2L3, E2-F1, L-UBC, UBCH7, UbcM4 |
| Description: | ubiquitin-conjugating enzyme E2L 3 [Source:HGNC Symbol;Acc:12488] |
| Organism: | Human (Homo sapiens) |
| Coordinates: | 22:21903735..21978323(+) |
>ENSG00000185651
ATGCAGGTCGCTGCAGGGACCCGAGGCGACACGCGCCTGCAGGAGGTGGCACTCCTGCCGCAGCTCTTCGATCTGCTTGT
CCTTGGCCAGCGGCGCGCTCGCCTGCTCCGACAGGTCCCGAGCGCGCTGGCGGGCAAAGACTTGGCACAGCTCCAGGCCG
GCGCAACTCTCGCCGGGTATAGGCGCGCTCACGGCCCGGAGGAGCTTGAAGAAATCCGCAAATGTGGGATGAAAAACTTC
CGTAACATCCAGGTTGATGAAGCTAATTTATTGACTTGGCAAGGGCTTATTGTTCCTGACAACCCTCCATATGATAAGGG
AGCCTTCAGAATCGAAATCAACTTTCCAGCAGAGTACCCATTCAAACCACCGAAGATCACATTTAAAACAAAGATCTATC
ACCCAAACATCGACGAAAAGGGGCAGGTCTGTCTGCCAGTAATTAGTGCCGAAAACTGGAAGCCAGCAACCAAAACCGAC
CAAGTAATCCAGTCCCTCATAGCACTGGTGAATGACCCCCAGCCTGAGCACCCGCTTCGGGCTGACCTAGCTGAAGAATA
CTCTAAGGACCGTAAAAAATTCTGTAAGAATGCTGAAGAGTTTACAAAGAAATATGGGGAAAAGCGACCTGTGGACTAA
ATGCAGGTCGCTGCAGGGACCCGAGGCGACACGCGCCTGCAGGAGGTGGCACTCCTGCCGCAGCTCTTCGATCTGCTTGT
CCTTGGCCAGCGGCGCGCTCGCCTGCTCCGACAGGTCCCGAGCGCGCTGGCGGGCAAAGACTTGGCACAGCTCCAGGCCG
GCGCAACTCTCGCCGGGTATAGGCGCGCTCACGGCCCGGAGGAGCTTGAAGAAATCCGCAAATGTGGGATGAAAAACTTC
CGTAACATCCAGGTTGATGAAGCTAATTTATTGACTTGGCAAGGGCTTATTGTTCCTGACAACCCTCCATATGATAAGGG
AGCCTTCAGAATCGAAATCAACTTTCCAGCAGAGTACCCATTCAAACCACCGAAGATCACATTTAAAACAAAGATCTATC
ACCCAAACATCGACGAAAAGGGGCAGGTCTGTCTGCCAGTAATTAGTGCCGAAAACTGGAAGCCAGCAACCAAAACCGAC
CAAGTAATCCAGTCCCTCATAGCACTGGTGAATGACCCCCAGCCTGAGCACCCGCTTCGGGCTGACCTAGCTGAAGAATA
CTCTAAGGACCGTAAAAAATTCTGTAAGAATGCTGAAGAGTTTACAAAGAAATATGGGGAAAAGCGACCTGTGGACTAA
| Library | Parental gene expression (RPM) |
|---|---|
| bodymap2_liver | 42 .97 RPM |
| bodymap2_lung | 60 .13 RPM |
| bodymap2_breast | 75 .39 RPM |
| bodymap2_adipose | 64 .74 RPM |
| bodymap2_adrenal | 69 .58 RPM |
| bodymap2_skeletal_muscle | 66 .00 RPM |
| bodymap2_thyroid | 65 .87 RPM |
| bodymap2_prostate | 79 .95 RPM |
| bodymap2_colon | 66 .79 RPM |
| bodymap2_testis | 74 .30 RPM |
| bodymap2_brain | 65 .09 RPM |
| bodymap2_heart | 56 .79 RPM |
| bodymap2_white_blood_cells | 108 .36 RPM |
| bodymap2_lymph_node | 81 .52 RPM |
| bodymap2_ovary | 69 .49 RPM |
| bodymap2_kidney | 66 .32 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Equus caballus | ENSECAG00000019274 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000072401 | within_species_paralog | 2 retrogenes | |
| Homo sapiens | ENSG00000078967 | within_species_paralog | 2 retrogenes | |
| Homo sapiens | ENSG00000170035 | other_paralog | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000001547 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000000192 | possible_ortholog | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000002610 | ortholog_one2one | 3 retrogenes | |
| Pongo abelii | ENSPPYG00000011602 | possible_ortholog | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000014114 | possible_ortholog | 1 retrogene | |
| Pteropus vampyrus | ENSPVAG00000013575 | ortholog_one2one | 1 retrogene | |
| Sorex araneus | ENSSARG00000005137 | ortholog_one2one | 3 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000016293 | ortholog_one2one | 2 retrogenes | |
| Tetraodon nigroviridis | ENSTNIG00000010600 | ortholog_one2many | 1 retrogene | |
| Takifugu rubripes | ENSTRUG00000003392 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_hsap_1094 | 78.57 | 98.05 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_hsap_1185 | 97.40 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_hsap_1338 | 98.70 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_hsap_1960 | 91.72 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSG00000185651 retrocopies