Parental gene:

UBE2L3, ENSOCUG00000002610

Aliases:None
Description:ubiquitin-conjugating enzyme E2L 3 [Source:HGNC Symbol;Acc:12488]
Organism:Rabbit (Oryctolagus cuniculus)
Coordinates:21:5473842..5501215(+)


>ENSOCUG00000002610
GCAGCGGCCTCCAGGAGGGCACCACTTAATCAACAGGAGCTTGAAGAGATCCGCAAATGTGGAATGAAAAACTTCCGTAA
CATCCAGGTTGATGAAGCTAATTTATTGACTTGGCAAGGGCTTATTGTTCCTGACAACCCTCCATATGACAAGGGAGCCT
TCAGAATCGAAATCAACTTTCCAGCAGAGTACCCATTCAAACCACCGAAGATCACATTTAAAACAAAGATCTATCACCCA
AACATTGATGAAAAGGGGCAGGTCTGTCTGCCCGTAATTAGTGCTGAAAACTGGAAGCCAGCAACCAAAACCGACCAAGT
AATCCAGTCCCTCATAGCACTGGTGAACGACCCCCAGCCCGAGCACCCGCTCCGGGCCGACCTAGCTGAAGAATACTCTA
AGGACCGTAAAAAATTCTGTAAGAATGCTGAAGAGTTTACAAAGAAATATGGGGAGAAGCGACCTGTGGACTAA

Library Parental gene expression (RPM)
SRP017611_liver 0 .46 RPM
SRP017611_kidney 1 .52 RPM
SRP017611_brain 1 .05 RPM



Species Parental gene accession Homology type Retrogenes number
Equus caballus ENSECAG00000019274 ortholog_one2one 1 retrogene
retro_ecab_116,
Homo sapiens ENSG00000185651 ortholog_one2one 4 retrogenes
retro_hsap_1094, retro_hsap_1185, retro_hsap_1338, retro_hsap_1960,
Myotis lucifugus ENSMLUG00000001547 ortholog_one2one 1 retrogene
retro_mluc_32,
Nomascus leucogenys ENSNLEG00000000192 possible_ortholog 1 retrogene
retro_nleu_97,
Oryctolagus cuniculus ENSOCUG00000006026 other_paralog 2 retrogenes
retro_ocun_134, retro_ocun_243,
Oryctolagus cuniculus ENSOCUG00000008900 within_species_paralog 1 retrogene
retro_ocun_1058,
Oryctolagus cuniculus ENSOCUG00000029448 within_species_paralog 10 retrogenes
retro_ocun_1220, retro_ocun_1426, retro_ocun_1536, retro_ocun_1660, retro_ocun_1856, retro_ocun_1941, retro_ocun_261, retro_ocun_467, retro_ocun_887, retro_ocun_988,
Pongo abelii ENSPPYG00000011602 possible_ortholog 1 retrogene
retro_pabe_99,
Pan troglodytes ENSPTRG00000014114 possible_ortholog 1 retrogene
retro_ptro_123,
Pteropus vampyrus ENSPVAG00000013575 ortholog_one2one 1 retrogene
retro_pvam_727,
Sorex araneus ENSSARG00000005137 ortholog_one2one 3 retrogenes
retro_sara_105, retro_sara_277, retro_sara_653,
Ictidomys tridecemlineatus ENSSTOG00000016293 ortholog_one2one 2 retrogenes
retro_itri_1528, retro_itri_655,
Tetraodon nigroviridis ENSTNIG00000010600 ortholog_one2many 1 retrogene
retro_tnig_16,
Takifugu rubripes ENSTRUG00000003392 ortholog_one2one 1 retrogene
retro_trub_39,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ocun_826 90.38 99.36
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2. retro_ocun_932 96.15 99.36
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3. retro_ocun_937 94.23 99.36
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Download FASTA sequences of all ENSOCUG00000002610 retrocopies