Parental gene:

ENSSTOG00000019768

Aliases:None
Description:None
Organism:Squirrel (Ictidomys tridecemlineatus)
Coordinates:JH393351.1:2149024..2166589(+)


>ENSSTOG00000019768
ATGGGGAATGTTTTTGAAAAGCTGTTTAAAAGTCTATTTGGGAAAAAAGAGATGCGGATTCTTATGGTGGGTTTGGATGC
AGCCGGAAAAACCACCATCTTGTATAAATTGAAGTTGGGAGAGATTGTGACTACCATCCCTACAATAGGTTTCAATGTGG
AGACGGTAGAATATAAAAATATCAGCTTCACAGTCTGGGATGTTGGTGGCCAGGACAAAATCAGACCTTTGTGGCGACAT
TATTTCCAGAACACTCAAGGTCTGATTTTTGTGGTTGACAGTAATGACAGAGAGAGGGTCAATGAGGCCCGGGAAGAACT
AACCAGAATGTTAGCGGAAGATGAACTCAGAGATGCAGTTTTATTGGTGTTTGTAAATAAACAGGACCTTCCCAATGCTA
TGAATGCAGCAGAGATAACGGACAAGCTCGGCTTACATTCCCTCCGCCAGAGAAACTGGTACATTCAGGCTACTTGTGCT
ACCAGTGGAGATGGGCTTTATGAAGGCCTGGACTGGCTCTCCAACCAGCTCAAAAACCAGAAGTGA

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000004184 ortholog_one2one 1 retrogene
retro_amel_1639,
Bos taurus ENSBTAG00000006785 ortholog_one2one 1 retrogene
retro_btau_26,
Ciona savignyi ENSCSAVG00000007011 possible_ortholog 1 retrogene
retro_csav_2,
Equus caballus ENSECAG00000009563 ortholog_one2one 1 retrogene
retro_ecab_106,
Latimeria chalumnae ENSLACG00000019009 possible_ortholog 1 retrogene
retro_lcha_10,
Mus musculus ENSMUSG00000062421 ortholog_one2one 1 retrogene
retro_mmus_2056,
Oryctolagus cuniculus ENSOCUG00000023198 ortholog_one2one 1 retrogene
retro_ocun_132,
Otolemur garnettii ENSOGAG00000002503 ortholog_one2many 1 retrogene
retro_ogar_263,
Ictidomys tridecemlineatus ENSSTOG00000004295 within_species_paralog 1 retrogene
retro_itri_175,
Ictidomys tridecemlineatus ENSSTOG00000009288 within_species_paralog 3 retrogenes
retro_itri_1754, retro_itri_273, retro_itri_363,
Ictidomys tridecemlineatus ENSSTOG00000013990 other_paralog 1 retrogene
retro_itri_659,
Ictidomys tridecemlineatus ENSSTOG00000019470 within_species_paralog 2 retrogenes
retro_itri_1439, retro_itri_1614,
Tetraodon nigroviridis ENSTNIG00000011685 possible_ortholog 1 retrogene
retro_tnig_19,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_itri_883 75.86 79.01
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Download FASTA sequences of all ENSSTOG00000019768 retrocopies