Parental gene:

RPL27, ENSSTOG00000020555

Aliases:None
Description:ribosomal protein L27 [Source:HGNC Symbol;Acc:10328]
Organism:Squirrel (Ictidomys tridecemlineatus)
Coordinates:JH393300.1:17697227..17699817(+)


>ENSSTOG00000020555
ATGGGCAAGTTCATGAAACCCGGGAAGGTGGTGTTGGTCCTAGCCGGACGCTACTCCGGACGCAAAGCTGTCATTGTGAA
GAATATTGATGATGGCACATCAGACCGTCCCTACAGCCATGCTCTGGTGGCTGGAATCGACCGCTATCCCCGCAAAGTGA
CAGCTGCCATGGGCAAGAAGAAAATCGCCAAAAGGTCAAAGATCAAGTCTTTTGTGAAAGTTTATAATTACAATCACCTC
ATGCCCACAAGGTACTCTGTTGATATCCCCTTGGACAAAACTGTCGTCAACAAGGATGTCTTCAGAGACCCTGCTCTTAA
ACGTAAGGCCCGTCGGGAAGCCAAGATTAAGTTTGAAGAGAGGTACAAGACAGGCAAGAACAAATGGTTCTTCCAGAAGC
TTCGGTTTTAG

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000000200 possible_ortholog 3 retrogenes
retro_amel_122, retro_amel_37, retro_amel_674,
Bos taurus ENSBTAG00000017441 possible_ortholog 6 retrogenes
retro_btau_1113, retro_btau_129, retro_btau_1565, retro_btau_1855, retro_btau_338, retro_btau_394,
Canis familiaris ENSCAFG00000014630 possible_ortholog 6 retrogenes
retro_cfam_1193, retro_cfam_2109, retro_cfam_339, retro_cfam_364, retro_cfam_947, retro_cfam_959,
Callithrix jacchus ENSCJAG00000013067 possible_ortholog 9 retrogenes
retro_cjac_1345, retro_cjac_1350, retro_cjac_1543, retro_cjac_1630, retro_cjac_2210, retro_cjac_275, retro_cjac_2828, retro_cjac_369, retro_cjac_776,
Dipodomys ordii ENSDORG00000010907 ortholog_one2one 6 retrogenes
retro_dord_154, retro_dord_335, retro_dord_477, retro_dord_527, retro_dord_601, retro_dord_784,
Felis catus ENSFCAG00000013142 possible_ortholog 6 retrogenes
retro_fcat_1026, retro_fcat_1184, retro_fcat_1824, retro_fcat_228, retro_fcat_698, retro_fcat_78,
Gorilla gorilla ENSGGOG00000026039 possible_ortholog 6 retrogenes
retro_ggor_1741, retro_ggor_1852, retro_ggor_2546, retro_ggor_2630, retro_ggor_298, retro_ggor_907,
Loxodonta africana ENSLAFG00000014220 possible_ortholog 3 retrogenes
retro_lafr_443, retro_lafr_739, retro_lafr_965,
Myotis lucifugus ENSMLUG00000004119 ortholog_one2many 1 retrogene
retro_mluc_359,
Macaca mulatta ENSMMUG00000008090 possible_ortholog 7 retrogenes
retro_mmul_1646, retro_mmul_1997, retro_mmul_418, retro_mmul_478, retro_mmul_52, retro_mmul_680, retro_mmul_925,
Monodelphis domestica ENSMODG00000015128 ortholog_one2one 1 retrogene
retro_mdom_1141,
Mus musculus ENSMUSG00000063316 ortholog_one2many 2 retrogenes
retro_mmus_223, retro_mmus_277,
Nomascus leucogenys ENSNLEG00000011901 possible_ortholog 2 retrogenes
retro_nleu_334, retro_nleu_45,
Oryctolagus cuniculus ENSOCUG00000003872 possible_ortholog 1 retrogene
retro_ocun_263,
Pteropus vampyrus ENSPVAG00000008817 ortholog_one2one 4 retrogenes
retro_pvam_1084, retro_pvam_1231, retro_pvam_25, retro_pvam_509,
Rattus norvegicus ENSRNOG00000020674 ortholog_one2many 8 retrogenes
retro_rnor_1150, retro_rnor_125, retro_rnor_1257, retro_rnor_1968, retro_rnor_2594, retro_rnor_2989, retro_rnor_386, retro_rnor_414,
Sarcophilus harrisii ENSSHAG00000012042 ortholog_one2many 4 retrogenes
retro_shar_10, retro_shar_253, retro_shar_730, retro_shar_741,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_itri_283 78.83 98.53
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_itri_836 70.00 100.00
Please wait, loading
Please wait, loading
Please wait, loading
3. retro_itri_926 53.92 72.06
Please wait, loading
Please wait, loading
Please wait, loading
4. retro_itri_1295 57.36 92.65
Please wait, loading
Please wait, loading
Please wait, loading
5. retro_itri_1812 80.65 87.50
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSSTOG00000020555 retrocopies