Parental gene:

PGAM1, ENSSTOG00000025955

Aliases:None
Description:phosphoglycerate mutase 1 (brain) [Source:HGNC Symbol;Acc:8888]
Organism:Squirrel (Ictidomys tridecemlineatus)
Coordinates:JH393446.1:2241344..2248532(-)


>ENSSTOG00000025955
ATGGCTGCCTACAAGCTGGTGCTGATTCGGCACGGTGAGAGCGCCTGGAACCTAGAGAATCGCTTCAGCGGCTGGTACGA
CGCCGACCTGAGCCCGGCGGGCCACGAGGAGGCAAAGCGCGGCGGGCAGGCTCTGCGAGATGCTGGCTATGAATTTGACA
TCTGCTTCACCTCAGTACAGAAAAGAGCAATCCGAACCCTCTGGACAGTGCTGGATGCCATTGACCAGATGTGGCTGCCA
GTGGTGAGGACTTGGCGCCTCAATGAACGGCACTATGGGGGTCTGACTGGCCTCAATAAAGCAGAAACTGCTGCCAAGCA
TGGCGAGGCCCAGGTAAAGATATGGAGGCGCTCCTATGATGTCCCACCGCCTCCAATGGAGCCTGATCACCCCTTCTACA
GCAATATCAGTAAGGATCGTAGGTATGCAGACCTTACTGAAGATCAGCTGCCTTCCTGTGAGAGTCTGAAGGACACCATT
GCCAGAGCTCTGCCCTTCTGGAATGAAGAAATAGTCCCCCAGATAAAGGAGGGGAAACGCGTTCTGATTGCAGCCCATGG
CAACAGCCTTAGGGGCATTGTCAAGCATCTGGAGGGTCTCTCTGAAGAGGCCATCATGGAGCTGAACCTGCCAACTGGTA
TTCCCATTGTCTACGAATTGGACAAGAACTTGAAGCCCATCAAGCCCATGCAGTTCCTGGGGGATGAAGAGACCGTTCGT
AAAGCGATGGAAGCCGTGGCTGCACAGGGCAAGGCAAAGAAATAA

Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000016575 possible_ortholog 1 retrogene
retro_cjac_370,
Cavia porcellus ENSCPOG00000006844 ortholog_one2one 4 retrogenes
retro_cpor_158, retro_cpor_539, retro_cpor_605, retro_cpor_660,
Echinops telfairi ENSETEG00000002467 possible_ortholog 1 retrogene
retro_etel_1595,
Gorilla gorilla ENSGGOG00000028602 possible_ortholog 13 retrogenes
retro_ggor_1220, retro_ggor_1500, retro_ggor_1667, retro_ggor_1824, retro_ggor_2061, retro_ggor_2118, retro_ggor_2353, retro_ggor_2849, retro_ggor_3005, retro_ggor_3034, retro_ggor_716, retro_ggor_738, retro_ggor_827,
Loxodonta africana ENSLAFG00000015979 ortholog_one2one 1 retrogene
retro_lafr_886,
Macaca mulatta ENSMMUG00000020027 ortholog_one2one 1 retrogene
retro_mmul_119,
Monodelphis domestica ENSMODG00000004242 possible_ortholog 4 retrogenes
retro_mdom_1342, retro_mdom_1893, retro_mdom_610, retro_mdom_668,
Mustela putorius furo ENSMPUG00000017045 ortholog_one2one 1 retrogene
retro_mputfur_1409,
Pan troglodytes ENSPTRG00000002807 ortholog_one2one 12 retrogenes
retro_ptro_1082, retro_ptro_1580, retro_ptro_1645, retro_ptro_1755, retro_ptro_2080, retro_ptro_2361, retro_ptro_2889, retro_ptro_2890, retro_ptro_3114, retro_ptro_3238, retro_ptro_634, retro_ptro_714,
Rattus norvegicus ENSRNOG00000050585 possible_ortholog 7 retrogenes
retro_rnor_1669, retro_rnor_2241, retro_rnor_2275, retro_rnor_2361, retro_rnor_2568, retro_rnor_691, retro_rnor_703,
Sus scrofa ENSSSCG00000010517 ortholog_one2one 1 retrogene
retro_sscr_373,
Drosophila melanogaster FBgn0014869 ortholog_many2many 1 retrogene
retro_dmel_57,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_itri_1187 52.51 70.08
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSSTOG00000025955 retrocopies