Parental gene:

RPS15A, ENSTBEG00000013626

Aliases:None
Description:ribosomal protein S15a [Source:HGNC Symbol;Acc:10389]
Organism:Treeshrew (Tupaia belangeri)
Coordinates:GeneScaffold_2394:43630..50368(-)


>ENSTBEG00000013626
ATGGTGCGCATGAATGTCCTGGCTGATGCCCTCAAGAGCATCAACAATGCTGAAAAGAGAGGCAAACGCCAGGTTCTTAT
TAGGCCGTGCTCCAAAGTCATTGTCCGGTTCCTGACTGTGATGATGAAGCATGGTTACATTGGCGAATTTGAAATCATTG
ATGACCACAGAGCTGGAAAAATTGTTGTGAACCTCACTGGCAGGTTAAACAAGTGTGGAGTGATCAGCCCCAGATTTGAT
GTGCAACTGAAAGATCTAGAGAAATGGCAGAATAATCTGCTCCCGTCACGTCAGTTTGGTTTCATTGTACTGACAACCTC
AGCTGGCATCATGGACCATGAAGAAGCAAGACGGAAACATACAGGAGGGAAAATCCTGGGATTCTTTTTCTAG

Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000020733 ortholog_one2one 5 retrogenes
retro_btau_14, retro_btau_171, retro_btau_3, retro_btau_57, retro_btau_98,
Callithrix jacchus ENSCJAG00000020071 possible_ortholog 6 retrogenes
retro_cjac_120, retro_cjac_128, retro_cjac_170, retro_cjac_231, retro_cjac_359, retro_cjac_80,
Gadus morhua ENSGMOG00000005862 ortholog_one2many 1 retrogene
retro_gmor_16,
Latimeria chalumnae ENSLACG00000011476 ortholog_one2one 1 retrogene
retro_lcha_55,
Loxodonta africana ENSLAFG00000026996 ortholog_one2one 13 retrogenes
retro_lafr_1161, retro_lafr_1201, retro_lafr_210, retro_lafr_236, retro_lafr_247, retro_lafr_309, retro_lafr_323, retro_lafr_356, retro_lafr_571, retro_lafr_613, retro_lafr_629, retro_lafr_759, retro_lafr_956,
Macropus eugenii ENSMEUG00000003956 ortholog_one2one 14 retrogenes
retro_meug_1163, retro_meug_1214, retro_meug_1344, retro_meug_1582, retro_meug_1675, retro_meug_1803, retro_meug_184, retro_meug_1845, retro_meug_195, retro_meug_2169, retro_meug_340, retro_meug_520, retro_meug_729, retro_meug_809,
Myotis lucifugus ENSMLUG00000005660 ortholog_one2one 15 retrogenes
retro_mluc_1170, retro_mluc_1376, retro_mluc_1408, retro_mluc_1692, retro_mluc_2038, retro_mluc_2242, retro_mluc_2353, retro_mluc_2406, retro_mluc_2465, retro_mluc_2512, retro_mluc_2514, retro_mluc_263, retro_mluc_823, retro_mluc_824, retro_mluc_949,
Monodelphis domestica ENSMODG00000005920 ortholog_one2one 6 retrogenes
retro_mdom_1147, retro_mdom_1626, retro_mdom_1659, retro_mdom_1852, retro_mdom_717, retro_mdom_83,
Otolemur garnettii ENSOGAG00000013199 possible_ortholog 14 retrogenes
retro_ogar_102, retro_ogar_1254, retro_ogar_1302, retro_ogar_1361, retro_ogar_1636, retro_ogar_2241, retro_ogar_2361, retro_ogar_269, retro_ogar_2775, retro_ogar_3283, retro_ogar_3367, retro_ogar_563, retro_ogar_712, retro_ogar_87,
Pan troglodytes ENSPTRG00000007823 possible_ortholog 2 retrogenes
retro_ptro_289, retro_ptro_76,
Rattus norvegicus ENSRNOG00000018320 ortholog_one2one 5 retrogenes
retro_rnor_1808, retro_rnor_2080, retro_rnor_2586, retro_rnor_324, retro_rnor_378,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_tbel_78 69.77 65.38
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2. retro_tbel_143 81.82 67.69
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3. retro_tbel_155 78.16 66.92
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4. retro_tbel_235 73.68 99.23
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5. retro_tbel_299 61.96 70.00
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6. retro_tbel_379 79.23 99.23
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7. retro_tbel_382 66.67 67.69
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8. retro_tbel_477 70.53 72.31
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9. retro_tbel_479 61.16 91.54
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10. retro_tbel_501 66.67 85.38
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11. retro_tbel_547 84.78 70.00
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12. retro_tbel_641 62.67 57.69
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13. retro_tbel_646 72.34 72.31
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14. retro_tbel_713 82.58 99.23
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15. retro_tbel_774 85.38 100.00
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16. retro_tbel_806 61.84 56.92
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17. retro_tbel_813 84.92 96.92
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18. retro_tbel_862 64.84 96.15
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19. retro_tbel_989 78.46 99.23
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20. retro_tbel_1030 72.04 71.54
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21. retro_tbel_1045 87.88 100.00
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22. retro_tbel_1051 80.22 70.00
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23. retro_tbel_1075 81.00 76.92
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24. retro_tbel_1079 78.63 100.00
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25. retro_tbel_1087 75.51 73.85
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26. retro_tbel_1100 73.11 88.46
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27. retro_tbel_1111 88.46 59.23
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28. retro_tbel_1118 85.14 56.92
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29. retro_tbel_1222 72.73 92.31
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30. retro_tbel_1284 79.57 71.54
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31. retro_tbel_1371 79.37 95.38
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32. retro_tbel_1398 74.58 88.46
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33. retro_tbel_1431 83.21 100.00
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34. retro_tbel_1436 90.91 67.69
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35. retro_tbel_1470 85.38 100.00
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36. retro_tbel_1499 78.86 92.31
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37. retro_tbel_1561 77.27 67.69
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38. retro_tbel_1625 85.71 59.23
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39. retro_tbel_1709 75.56 68.46
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40. retro_tbel_1800 80.00 92.31
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41. retro_tbel_1842 73.98 93.08
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42. retro_tbel_1886 76.74 99.23
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43. retro_tbel_1970 73.50 88.46
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44. retro_tbel_1975 67.03 69.23
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45. retro_tbel_1976 74.65 54.62
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46. retro_tbel_2318 86.11 55.38
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47. retro_tbel_2394 72.31 99.23
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48. retro_tbel_2395 92.44 91.54
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49. retro_tbel_2403 67.27 84.62
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50. retro_tbel_2552 82.58 100.00
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51. retro_tbel_2656 79.28 85.38
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52. retro_tbel_2686 67.86 64.62
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53. retro_tbel_2734 73.28 100.00
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54. retro_tbel_2779 83.48 88.46
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55. retro_tbel_2794 83.85 99.23
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56. retro_tbel_2871 87.02 100.00
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57. retro_tbel_2904 67.44 66.15
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58. retro_tbel_2909 84.52 64.62
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59. retro_tbel_2921 83.97 99.23
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60. retro_tbel_2977 86.11 82.31
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61. retro_tbel_2982 66.29 66.92
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62. retro_tbel_2990 87.18 90.00
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63. retro_tbel_3074 80.62 99.23
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64. retro_tbel_3087 81.97 93.08
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65. retro_tbel_3173 69.64 85.38
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66. retro_tbel_3237 93.08 100.00
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67. retro_tbel_3419 79.63 81.54
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68. retro_tbel_3428 86.11 82.31
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69. retro_tbel_3489 78.95 100.00
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70. retro_tbel_3498 79.23 98.46
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71. retro_tbel_3562 69.91 86.15
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72. retro_tbel_3610 69.16 80.77
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73. retro_tbel_3657 81.67 92.31
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74. retro_tbel_3752 84.76 80.77
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75. retro_tbel_3761 62.64 69.23
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76. retro_tbel_3791 89.23 100.00
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77. retro_tbel_3884 89.15 99.23
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78. retro_tbel_4084 64.34 99.23
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79. retro_tbel_4195 90.77 99.23
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80. retro_tbel_4198 63.16 100.00
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81. retro_tbel_4210 69.23 99.23
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82. retro_tbel_4550 75.56 69.23
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83. retro_tbel_4584 72.31 100.00
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84. retro_tbel_4605 86.26 100.00
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85. retro_tbel_4626 85.71 96.92
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86. retro_tbel_4707 89.39 100.00
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Download FASTA sequences of all ENSTBEG00000013626 retrocopies