RetrogeneDB ID: | retro_tbel_4084 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_6587:77332..77716(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS15A | ||
Ensembl ID: | ENSTBEG00000013626 | ||
Aliases: | None | ||
Description: | ribosomal protein S15a [Source:HGNC Symbol;Acc:10389] |
Percent Identity: | 64.34 % |
Parental protein coverage: | 99.23 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 0 |
Parental | MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEIIDDHRAGKIVVNLTGRLN |
.V.MNVL.DALK.INNA.K.GK.Q.LI...SK....F...M.KHGY.G.FE..DD.R..KIVV.LTG.LN | |
Retrocopy | IVSMNVLVDALKRINNAKKKGKCQLLISLYSKSLSGF*-LMLKHGYVGKFETVDDYRLEKIVVDLTGWLN |
Parental | KCGVISPRFDVQLKDLEKWQNNLLPSRQFGFIVLTTSAGIMDHEEARRKHTGGKILGFF |
.CG.IS.RFDVQL.D.EK.Q.NL.PS.QFGFI..TTSA.IMDH..AR.K..GGKIL.FF | |
Retrocopy | ECGMISLRFDVQLRDIEKCQKNLIPSHQFGFIAPTTSAAIMDHKDARQKYMGGKIL*FF |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |