RetrogeneDB - Parental gene ENSTSYG00000006915 details

                            
>ENSTSYG00000006915
ATGAGCAGCGAGGCCGAGACCCAGCAGCCGCCCGCCGCCCCCCCCGCCGCCCCCGCCCTTAGCGCCGCCGACACCATGTC

CGGCACCCCGGGCAGCCTGCCAGGGAGCGGAGACCTGGTCGCTCTCATATCTCCGGCATTTGCCCGGGCGGGGAAGAACG

TGATCGCAACGAAGGTTTTGGGAACAGTAAAATGGTTCAATGTAAGAAACGGATATGGTTTCATCAACAGNNNNNNNNNN

NNNNNNNNNNNNNNNNNNNNNNNNACTGCCATAAAGAAGAATAACCCCAGGAAGTACCTTCGCAGTGTAGGAGATGGAGA

GACTGTGGAGTTTGATGTTGTTGAAGGAGAAAAGGGTGCGGAGGCAGCAAATGTTACAGGCCCTGGTGGTGTTCCAGTTC

AAGGCAGTAAATATGCAGCAGATCGTAACCATTATAGACGCTATCCACGTCGTAGGGGTCCTCCACGCAATTACCAGCAG

AATTACCAGAATAGTGAGAGTGGGGAAAAGAACGAGGGATCGGAGAGTGCTCCCGAAGGCCAGGCCCAACAACGCAGGCC

CTACCGCAGGCGAAGGTTCCCACCTTACTACATGCGGAGGCCCTATGGGCGTCGACCACAGTATTCCAACCCTCCTGTGC

AAGGAGAAGTGATGGAGGGTGCTGACAACCAGGGTGCAGGAGAACAAGGTAGACCAGTGAGGCAGAATATGTATCGGGGT

TACAGACCACGATTCCGTAGGGGCCCTCCTCGCCAAAGACAGCCTAGAGAGGACGGCAATGAAGAGGATAAAGAAAATCA

AGGAGATGAGACCCAAGGTCAGCAGCCACCTCAACGTCGGTACCGCCGCAACTTCAATTACCGACGCAGACGCCCAGAAA

ACCCTAAACCCCAAGATGGCAAAGAGACAAAAGCAGCCGATCCACCAGCTGAGAATTCGTCCGCTCCCGAGGCTGAGCAG

GGCGGGGCTGAGTAA

Species	Parental gene accession	Homology type	Retrogenes number
Ailuropoda melanoleuca	ENSAMEG00000000494	ortholog_one2one	9 retrogenes	retro_amel_1280, retro_amel_1358, retro_amel_141, retro_amel_1486, retro_amel_215, retro_amel_418, retro_amel_625, retro_amel_837, retro_amel_909,
Canis familiaris	ENSCAFG00000002541	ortholog_one2one	4 retrogenes	retro_cfam_1312, retro_cfam_2118, retro_cfam_758, retro_cfam_91,
Callithrix jacchus	ENSCJAG00000003155	ortholog_one2one	6 retrogenes	retro_cjac_1261, retro_cjac_1701, retro_cjac_2718, retro_cjac_3156, retro_cjac_4172, retro_cjac_817,
Cavia porcellus	ENSCPOG00000010888	ortholog_one2one	3 retrogenes	retro_cpor_654, retro_cpor_833, retro_cpor_905,
Felis catus	ENSFCAG00000022604	ortholog_one2one	6 retrogenes	retro_fcat_145, retro_fcat_1554, retro_fcat_1956, retro_fcat_241, retro_fcat_503, retro_fcat_631,
Homo sapiens	ENSG00000065978	ortholog_one2one	4 retrogenes	retro_hsap_1433, retro_hsap_3886, retro_hsap_4250, retro_hsap_4301,
Loxodonta africana	ENSLAFG00000007597	possible_ortholog	1 retrogene	retro_lafr_804,
Microcebus murinus	ENSMICG00000014984	ortholog_one2one	19 retrogenes	retro_mmur_1098, retro_mmur_1285, retro_mmur_1326, retro_mmur_1435, retro_mmur_1437, retro_mmur_1445, retro_mmur_1621, retro_mmur_199, retro_mmur_315, retro_mmur_413, retro_mmur_581, retro_mmur_640, retro_mmur_676, retro_mmur_679, retro_mmur_726, retro_mmur_837, retro_mmur_900, retro_mmur_919, retro_mmur_942,
Macaca mulatta	ENSMMUG00000013136	ortholog_one2one	5 retrogenes	retro_mmul_1139, retro_mmul_1423, retro_mmul_2017, retro_mmul_423, retro_mmul_861,
Nomascus leucogenys	ENSNLEG00000012324	ortholog_one2one	7 retrogenes	retro_nleu_1053, retro_nleu_1188, retro_nleu_1312, retro_nleu_1601, retro_nleu_1749, retro_nleu_1888, retro_nleu_270,
Oryctolagus cuniculus	ENSOCUG00000028047	possible_ortholog	2 retrogenes	retro_ocun_1519, retro_ocun_1953,
Otolemur garnettii	ENSOGAG00000006784	possible_ortholog	25 retrogenes	retro_ogar_1127, retro_ogar_1246, retro_ogar_1350, retro_ogar_1371, retro_ogar_1497, retro_ogar_2011, retro_ogar_2018, retro_ogar_2302, retro_ogar_2359, retro_ogar_2607, retro_ogar_2654, retro_ogar_3170, retro_ogar_3225, retro_ogar_324, retro_ogar_3303, retro_ogar_3316, retro_ogar_3317, retro_ogar_3366, retro_ogar_3416, retro_ogar_3474, retro_ogar_448, retro_ogar_572, retro_ogar_678, retro_ogar_690, retro_ogar_753,
Pongo abelii	ENSPPYG00000001466	ortholog_one2one	7 retrogenes	retro_pabe_1216, retro_pabe_1320, retro_pabe_2054, retro_pabe_2292, retro_pabe_3167, retro_pabe_3388, retro_pabe_3502,
Pteropus vampyrus	ENSPVAG00000005504	ortholog_one2one	7 retrogenes	retro_pvam_1255, retro_pvam_1348, retro_pvam_1391, retro_pvam_145, retro_pvam_405, retro_pvam_76, retro_pvam_971,
Sorex araneus	ENSSARG00000007896	ortholog_one2one	1 retrogene	retro_sara_559,
Tursiops truncatus	ENSTTRG00000001353	ortholog_one2one	2 retrogenes	retro_ttru_461, retro_ttru_746,
Vicugna pacos	ENSVPAG00000000068	ortholog_one2one	2 retrogenes	retro_vpac_235, retro_vpac_647,

#	RetrogeneDB ID	Identity (%)	Coverage (%)	ORF conservation	Expression evidence	RDV
1.	retro_tsyr_173	79.88	100.00	Please wait, loading	Please wait, loading	Please wait, loading
2.	retro_tsyr_610	65.57	55.25	Please wait, loading	Please wait, loading	Please wait, loading
3.	retro_tsyr_840	84.94	51.23	Please wait, loading	Please wait, loading	Please wait, loading
4.	retro_tsyr_996	60.71	50.62	Please wait, loading	Please wait, loading	Please wait, loading
5.	retro_tsyr_1030	78.47	83.95	Please wait, loading	Please wait, loading	Please wait, loading
6.	retro_tsyr_2037	83.23	51.54	Please wait, loading	Please wait, loading	Please wait, loading

Download FASTA sequences of all ENSTSYG00000006915 retrocopies

Parental gene:	YBX1, ENSTSYG00000006915
Aliases:	None
Description:	Y box binding protein 1 [Source:HGNC Symbol;Acc:8014]
Organism:	*Tarsier (Tarsius syrichta)*
Coordinates:	GeneScaffold_551:306..16932(+)

Parental gene:

YBX1, ENSTSYG00000006915