Parental gene:

PAPOLA, ENSVPAG00000006464

Aliases:None
Description:poly(A) polymerase alpha [Source:HGNC Symbol;Acc:14981]
Organism:Alpaca (Vicugna pacos)
Coordinates:GeneScaffold_234:254935..297749(+)


>ENSVPAG00000006464
CCAGTTACAACGCAGGGATCACAAACACAGCTGCCACAGAAGCACTATGGCATTACCTCTCCCATCAGCTTAGCAGCTCC
CAAGGAGACTGACTGCCTGCTTACACAGAAATTAATTGAGACTCTGAAGCCCTTTGGGGTTTTTGAAGAGGAAGAGGAGC
TGCAGCGCAGGATTTTAATTTTGGGAAAGTTAAATAACCTGGTGAAAGAGTGGATACGAGAAATCAGTGAAAGCAAGAAT
CTCCCACAATCTGTAATTGAAAATGTTGGTGGAAAAATTTTTACATTTGGATCTTATAGATTAGGAGTACATACAAAAGG
TGCCGATATTGATGCATTGTGTGTTGCACCAAGACATGTTGATCGAAGTGACTTTTTCACCTCATTCTATGAAAAGTTGA
AATTACAGGAAGAAGTAAAAGATTTAAGAGCTGTTGAAGAAGCATTTGTACCAGTTATCAAACTATGTTTTGATGGGATA
GAGATTGATATTTTGTTTGCACGGTTAGCACTGCAGACTATTCCAGAAGACTTGGACTTACGAGATGACAGTCTGCTTAA
AAACTTAGATATAAGATGCATAAGAAGTCTTAACGGTTGCAGGGTAACCGATGAAATTTTACATCTAGTACCAAACATTG
ACAACTTCAGGTTAACCCTGAGAGCTATCAAACTGTGGGCCAAACGCCACAACATCTATTCCAATATATTAGGTTTCCTC
GGTGGTGTTTCCTGGGCTATGCTAGTAGCAAGAACTTGCCAGCTTTATCCAAATGCAATAGCATCAACTCTTGTACATAA
ATTTTTCTTGGTATTTTCTAAATGGGAATGGCCAAATCCAGTCCTATTGAAACAGCCTGAAGAATGCAATCTTAATTTGC
CTGTATGGGACCCAAGGGTAAACCCCAGTGATAGGTACCATCTTATGCCTATAATTACACCAGCATACCCACAACAGAAC
TCCACGTACAATGTGTCCGTTTCAACACGGATGGTCATGGTTGAGGAGTTTAAACAAGGTCTTGCTATCACAGATGAAAT
TTTGCTGAGTAAGGCAGAGTGGTCCAAACTTTTTGAAGCTCCAAACTTCTTTCAAAAGTACAAGCATTATATTGTACTTC
TAGCAAGTGCACCAACAGAAAAACAACGCCTAGAATGGGTGGGCTTGGTGGAATCAAAAATTCGAATCCTGGTTGGAAGT
TTGGAGAAGAATGAATTCATTACACTGGCGCATGTGAATCCCCAGTCATTTCCAGCACCCAAAGAAAATCCTGACAAGGA
AGAATTTCGCACGATGTGGGTGATTGGGTTAGTGTTTAAAAAAACAGAAAACTCTGAAAATCTCAGTGTTGATCTCACCT
ATGATATTCAGTCTTTCACAGATACAGTTTATAGGCAAGCAATAAACAGCAAGATGTTTGAGGTGGACATGAAAATTGCT
GCAATGCATGTAAAAAGAAAGCAACTCCATCAACTACTACCTAATCATGTGCTTCAGAAAAAGAAAAAGCATTCAACAGA
AGGCGTCAGGTTGACACCTCTGAATGACAGCAGCCTCGATTTGTCTATGGACAGTGATAACAGCATGTCTGTGCCTTCAC
CTACTAGTGCTATGAAGACCAGTCCATTGAACAGTTCTGGCAGCTCTCAGGGCAGAAACAGTCCTGCTCCAGCTGTAACA
GCAGCTTCTGTGACCAACATACAGGCTACTGAAGTCTCTGCGCCACAAGTAAATTCCAGTGAAAGCTCAGGGGGTACAGC
GAGTGAAAGCATTCCTCAAACTGCCACACAGCCAGCCATTTCACCACCACCAAAGCCTACGGTCTCCAGAGTTGTTTCTT
CGACACGTCTGGTAAACCCAGCACCAAGACCTTCAGGAAACGCAGCAGCAAAGATCCCTAACCCTATAGTAGGAGTCAAG
AGGACATCCTCACCTCATAAAGAAGAGAGTCCCAAGAAGACCAGAACAGAAGAGGATGAAACAAGCGAAGATGCTAACTG
TCTTGCTTTGAGTGGACATGATAAAACAGAAACAAAGGAACAACTTGATACAGAGACAAGTACAACTCAATCAGAAACCA
TTCAGACAGCGGCTTCTCTGTTGGCCTCTCAGAAAACATCCAGTACAGACCTTTCTGATATCCCTGCTCTCCCTGCAAAT
CCTATTCCTGTTATCAAGAATTCAATAAAACTGAGATTGAATCGGTAA

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000014142 ortholog_one2one 1 retrogene
retro_amel_517,
Bos taurus ENSBTAG00000004054 ortholog_one2one 1 retrogene
retro_btau_1078,
Canis familiaris ENSCAFG00000017783 ortholog_one2one 1 retrogene
retro_cfam_1783,
Callithrix jacchus ENSCJAG00000006512 ortholog_one2one 2 retrogenes
retro_cjac_1763, retro_cjac_543,
Homo sapiens ENSG00000090060 ortholog_one2one 1 retrogene
retro_hsap_30,
Gorilla gorilla ENSGGOG00000006287 ortholog_one2one 1 retrogene
retro_ggor_202,
Myotis lucifugus ENSMLUG00000010922 ortholog_one2one 1 retrogene
retro_mluc_1396,
Macaca mulatta ENSMMUG00000018610 ortholog_one2one 1 retrogene
retro_mmul_1675,
Monodelphis domestica ENSMODG00000012887 ortholog_one2many 2 retrogenes
retro_mdom_1714, retro_mdom_1916,
Mustela putorius furo ENSMPUG00000003054 ortholog_one2one 1 retrogene
retro_mputfur_1375,
Mus musculus ENSMUSG00000021111 possible_ortholog 1 retrogene
retro_mmus_37,
Nomascus leucogenys ENSNLEG00000000625 ortholog_one2one 1 retrogene
retro_nleu_2771,
Otolemur garnettii ENSOGAG00000004611 ortholog_one2one 1 retrogene
retro_ogar_987,
Pongo abelii ENSPPYG00000006128 ortholog_one2one 1 retrogene
retro_pabe_3113,
Pan troglodytes ENSPTRG00000006704 ortholog_one2one 1 retrogene
retro_ptro_2595,
Pteropus vampyrus ENSPVAG00000013925 ortholog_one2one 1 retrogene
retro_pvam_360,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_vpac_378 84.25 81.90
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Download FASTA sequences of all ENSVPAG00000006464 retrocopies