Parental gene: | OB01G29280 |
| Aliases: | None |
| Description: | None |
| Organism: | Oryza brachyantha |
| Coordinates: | 1:15724901..15729720(+) |
>OB01G29280
ATGGCGCCCGCCCCTCGCCTCCTCCCCCTACTCCCCCCTCTCGCGGCGCTGCTCCTCTGCGCGCACCTCGCCGTCGCGGT
GGCGCGGCCGCGGATGGAGCCGTGGGGCAGCCGCGGGCCGCGGATGGAGCCGTGGGACAGCAGCGACAACCTCCTCCTGC
CGTCGGAGCGGGAGTGGGAGCGGGAGCGGGAGCGCAGCGTGGAGGATGAGGACGCCGCGGAGGCCGCCGTCGGGACGAGG
TGGGCCGTCCTCATCGCCGGCTCCAACGGCTACTACAACTACCGCCACCAGGCCGACGTCTGCCATGCCTACCAGATCAT
GAAGAAGGGCGGGCTCAAGGACGAGAACATCATCGTCTTCATGTACGACGACATCGCGCACAATTCGGAGAATCCGAGGC
CCGGTGTCATCATCAACCATCCCCAGGGTGGCGATGTCTATGCTGGGGTCCCGAAGGATTACACCGGGAAGGATGTTAAT
GTCAAGAACTTGTTTGCTGTTCTGCTCGGCGACAAAACTGCTGTCAGTGGTGGGAGTGGCAAAGTTCTGGACAGTGGCCC
CAACGATCATATTTTCATTTTTTACAGTGACCATGGGGGTCCTGGTGTCCTTGGGATGCCAACCTATCCATACCTATATG
GAGATGATCTTGTAGATGTTCTGAAGAAGAAGCATGCTGCTGGGACGTACAAAAGCCTGGTCTTTTACCTTGAAGCCTGT
GAATCCGGAAGCATCTTTGAGGGTCTATTGCCTGATGACATCAATGTTTATGCCACCACTGCGTCAAACGCAGATGAGAG
CAGCTGGGGGACATACTGCCCCGGGGAGTACCCGAGCCCACCTCCGGAGTACGACACATGCCTGGGGGACTTGTACAGCG
TTGCTTGGATGGAAGACTGCGATGTCCACAACCTGAGAACTGAATCACTCAGGCAGCAATACAATCTGGTCAAGGAAAGG
ACATCTGTTCAGCACACGTATGACTCTGGTTCACATGTGATGCAATACGGTTCTATAGAGCTGAATGCCCATCATCTGTT
CTTGTACATGGGTTCCAATCCTGCTAACGACAATTCTACGTTCGTGGAAGATAACTCATTGCCATCGTTCTCAAGGGCTG
TTAATCAGCGGGATGCTGACCTGGTTTACTTCTGGCAGAAGTACCGGAAATTGGCTGAGGGTTCTCCTGAGAAAAATGAA
GCTCGGAAGCAATTGCTTGAAATGATGGCACATAGGTCTCATGTTGACAACAGCGTTGAGCTGATCGGAAATCTTCTCTT
TGGCTCTGAGGAAGGTCCACGGGTTCTAAAGGCTGTTCGTGCAACTGGTGAACCTCTGATTGATGACTGGAGCTGTCTCA
AGTCTATGGTGCGGGCTTTCGAAGCACAATGTGGCTCACTGGCGCAGTACGGAATGAAGCACATGCGGTCCTTTGCAAAC
ATCTGTATTGCTGGCATCTCTGCTGAAGAGATGGCAAAGGTTGCCGCACAGGCTTGCACCAGCATTCCCTCCAACCCATG
GAGTTCCACCCATAGGGGCTTTAGTGCTTAA
ATGGCGCCCGCCCCTCGCCTCCTCCCCCTACTCCCCCCTCTCGCGGCGCTGCTCCTCTGCGCGCACCTCGCCGTCGCGGT
GGCGCGGCCGCGGATGGAGCCGTGGGGCAGCCGCGGGCCGCGGATGGAGCCGTGGGACAGCAGCGACAACCTCCTCCTGC
CGTCGGAGCGGGAGTGGGAGCGGGAGCGGGAGCGCAGCGTGGAGGATGAGGACGCCGCGGAGGCCGCCGTCGGGACGAGG
TGGGCCGTCCTCATCGCCGGCTCCAACGGCTACTACAACTACCGCCACCAGGCCGACGTCTGCCATGCCTACCAGATCAT
GAAGAAGGGCGGGCTCAAGGACGAGAACATCATCGTCTTCATGTACGACGACATCGCGCACAATTCGGAGAATCCGAGGC
CCGGTGTCATCATCAACCATCCCCAGGGTGGCGATGTCTATGCTGGGGTCCCGAAGGATTACACCGGGAAGGATGTTAAT
GTCAAGAACTTGTTTGCTGTTCTGCTCGGCGACAAAACTGCTGTCAGTGGTGGGAGTGGCAAAGTTCTGGACAGTGGCCC
CAACGATCATATTTTCATTTTTTACAGTGACCATGGGGGTCCTGGTGTCCTTGGGATGCCAACCTATCCATACCTATATG
GAGATGATCTTGTAGATGTTCTGAAGAAGAAGCATGCTGCTGGGACGTACAAAAGCCTGGTCTTTTACCTTGAAGCCTGT
GAATCCGGAAGCATCTTTGAGGGTCTATTGCCTGATGACATCAATGTTTATGCCACCACTGCGTCAAACGCAGATGAGAG
CAGCTGGGGGACATACTGCCCCGGGGAGTACCCGAGCCCACCTCCGGAGTACGACACATGCCTGGGGGACTTGTACAGCG
TTGCTTGGATGGAAGACTGCGATGTCCACAACCTGAGAACTGAATCACTCAGGCAGCAATACAATCTGGTCAAGGAAAGG
ACATCTGTTCAGCACACGTATGACTCTGGTTCACATGTGATGCAATACGGTTCTATAGAGCTGAATGCCCATCATCTGTT
CTTGTACATGGGTTCCAATCCTGCTAACGACAATTCTACGTTCGTGGAAGATAACTCATTGCCATCGTTCTCAAGGGCTG
TTAATCAGCGGGATGCTGACCTGGTTTACTTCTGGCAGAAGTACCGGAAATTGGCTGAGGGTTCTCCTGAGAAAAATGAA
GCTCGGAAGCAATTGCTTGAAATGATGGCACATAGGTCTCATGTTGACAACAGCGTTGAGCTGATCGGAAATCTTCTCTT
TGGCTCTGAGGAAGGTCCACGGGTTCTAAAGGCTGTTCGTGCAACTGGTGAACCTCTGATTGATGACTGGAGCTGTCTCA
AGTCTATGGTGCGGGCTTTCGAAGCACAATGTGGCTCACTGGCGCAGTACGGAATGAAGCACATGCGGTCCTTTGCAAAC
ATCTGTATTGCTGGCATCTCTGCTGAAGAGATGGCAAAGGTTGCCGCACAGGCTTGCACCAGCATTCCCTCCAACCCATG
GAGTTCCACCCATAGGGGCTTTAGTGCTTAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Zea mays | GRMZM2G093032 | ortholog_one2many | 1 retrogene | |
| Oryza longistaminata | KN538817.1_FG009 | ortholog_one2one | 1 retrogene | |
| Oryza barthii | OBART01G19640 | ortholog_one2one | 1 retrogene | |
| Oryza glumaepatula | OGLUM01G23260 | ortholog_one2one | 1 retrogene | |
| Oryza meridionalis | OMERI01G18100 | ortholog_one2one | 1 retrogene | |
| Oryza punctata | OPUNC01G20010 | ortholog_one2one | 1 retrogene | |
| Oryza glaberrima | ORGLA01G0161200 | ortholog_one2one | 1 retrogene | |
| Oryza sativa japonica | OS01G0559600 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_obra_23 | 64.19 | 81.78 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all OB01G29280 retrocopies