Parental gene:

OB01G29280

Aliases:None
Description:None
Organism:Oryza brachyantha
Coordinates:1:15724901..15729720(+)


>OB01G29280
ATGGCGCCCGCCCCTCGCCTCCTCCCCCTACTCCCCCCTCTCGCGGCGCTGCTCCTCTGCGCGCACCTCGCCGTCGCGGT
GGCGCGGCCGCGGATGGAGCCGTGGGGCAGCCGCGGGCCGCGGATGGAGCCGTGGGACAGCAGCGACAACCTCCTCCTGC
CGTCGGAGCGGGAGTGGGAGCGGGAGCGGGAGCGCAGCGTGGAGGATGAGGACGCCGCGGAGGCCGCCGTCGGGACGAGG
TGGGCCGTCCTCATCGCCGGCTCCAACGGCTACTACAACTACCGCCACCAGGCCGACGTCTGCCATGCCTACCAGATCAT
GAAGAAGGGCGGGCTCAAGGACGAGAACATCATCGTCTTCATGTACGACGACATCGCGCACAATTCGGAGAATCCGAGGC
CCGGTGTCATCATCAACCATCCCCAGGGTGGCGATGTCTATGCTGGGGTCCCGAAGGATTACACCGGGAAGGATGTTAAT
GTCAAGAACTTGTTTGCTGTTCTGCTCGGCGACAAAACTGCTGTCAGTGGTGGGAGTGGCAAAGTTCTGGACAGTGGCCC
CAACGATCATATTTTCATTTTTTACAGTGACCATGGGGGTCCTGGTGTCCTTGGGATGCCAACCTATCCATACCTATATG
GAGATGATCTTGTAGATGTTCTGAAGAAGAAGCATGCTGCTGGGACGTACAAAAGCCTGGTCTTTTACCTTGAAGCCTGT
GAATCCGGAAGCATCTTTGAGGGTCTATTGCCTGATGACATCAATGTTTATGCCACCACTGCGTCAAACGCAGATGAGAG
CAGCTGGGGGACATACTGCCCCGGGGAGTACCCGAGCCCACCTCCGGAGTACGACACATGCCTGGGGGACTTGTACAGCG
TTGCTTGGATGGAAGACTGCGATGTCCACAACCTGAGAACTGAATCACTCAGGCAGCAATACAATCTGGTCAAGGAAAGG
ACATCTGTTCAGCACACGTATGACTCTGGTTCACATGTGATGCAATACGGTTCTATAGAGCTGAATGCCCATCATCTGTT
CTTGTACATGGGTTCCAATCCTGCTAACGACAATTCTACGTTCGTGGAAGATAACTCATTGCCATCGTTCTCAAGGGCTG
TTAATCAGCGGGATGCTGACCTGGTTTACTTCTGGCAGAAGTACCGGAAATTGGCTGAGGGTTCTCCTGAGAAAAATGAA
GCTCGGAAGCAATTGCTTGAAATGATGGCACATAGGTCTCATGTTGACAACAGCGTTGAGCTGATCGGAAATCTTCTCTT
TGGCTCTGAGGAAGGTCCACGGGTTCTAAAGGCTGTTCGTGCAACTGGTGAACCTCTGATTGATGACTGGAGCTGTCTCA
AGTCTATGGTGCGGGCTTTCGAAGCACAATGTGGCTCACTGGCGCAGTACGGAATGAAGCACATGCGGTCCTTTGCAAAC
ATCTGTATTGCTGGCATCTCTGCTGAAGAGATGGCAAAGGTTGCCGCACAGGCTTGCACCAGCATTCCCTCCAACCCATG
GAGTTCCACCCATAGGGGCTTTAGTGCTTAA

Species Parental gene accession Homology type Retrogenes number
Zea mays GRMZM2G093032 ortholog_one2many 1 retrogene
retro_zmay_6,
Oryza longistaminata KN538817.1_FG009 ortholog_one2one 1 retrogene
retro_olon_1,
Oryza barthii OBART01G19640 ortholog_one2one 1 retrogene
retro_obar_1,
Oryza glumaepatula OGLUM01G23260 ortholog_one2one 1 retrogene
retro_oglu_32,
Oryza meridionalis OMERI01G18100 ortholog_one2one 1 retrogene
retro_omer_24,
Oryza punctata OPUNC01G20010 ortholog_one2one 1 retrogene
retro_opun_12,
Oryza glaberrima ORGLA01G0161200 ortholog_one2one 1 retrogene
retro_ogla_9,
Oryza sativa japonica OS01G0559600 ortholog_one2one 1 retrogene
retro_osat_9,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_obra_23 64.19 81.78
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Download FASTA sequences of all OB01G29280 retrocopies