Parental gene: | OGLUM01G23260 |
| Aliases: | None |
| Description: | None |
| Organism: | Oryza glumaepatula |
| Coordinates: | 1:23547521..23552811(+) |
>OGLUM01G23260
ATGGCGGCGCGCGCTCGCCTCCGCCTCGTCCTGCCCCCGCTCGCGGCGCTGCTCCTCTTCGCGCACCTCGCCGTCGCGGT
GGCGCGGCCGCGGTGGGAGGAGGAGGGCAGCAACCTCCGCCTGCCGTCGGAGCGCGGCGTGGCGGCGGCCATGGCGGACG
ACGCCGCCGAGGCCGCCGAGGGCACCAGGTGGGCCGTCCTCATCGCCGGCTCCAACGGCTACTACAACTACCGCCACCAG
GCGGATGTCTGCCATGCCTACCAGATCATGAAGAGGGGCGGGCTCAAGGACGAGAACATCATCGTCTTCATGTACGATGA
CATCGCGCACAACCCGGAGAATCCGAGGCCTGGTGTCATCATCAACCATCCCCAGGGTGGCGATGTCTATGCTGGGGTCC
CGAAGGATTACACTGGGAAGGAGGTTAATGTCAAGAACTTGTTTGCTGTTCTGCTCGGTAACAAAACTGCTGTCAAAGGT
GGGAGTGGCAAAGTCCTGGACAGTGGCCCCAACGATCATATTTTCATTTTTTACAGTGACCATGGGGGTCCTGGTGTCCT
TGGGATGCCAACCTATCCATACCTCTACGGTGATGATCTTGTAGATGTTCTGAAGAAGAAGCATGCTGCTGGGACGTACA
AAAGCCTGGTCTTTTACCTTGAAGCCTGTGAATCTGGAAGCATCTTTGAGGGTCTATTGCCATATGACATCAATGTTTAT
GCCACCACTGCATCAAATGCTGATGAGAGCAGCTGGGGAACATACTGCCCCGGGGAGTACCCAAGCCCACCTCCGGAGTA
CGACACATGCCTGGGGGACTTGTACAGCGTTGCTTGGATGGAAGACAGCGATGTCCACAACCTGAGAACTGAATCACTCA
AGCAGCAGTACAATCTCGTCAAGGAAAGGACATCTGTGCAGCACACATATTACTCTGGGTCACATGTGATGGAATACGGT
TCTTTAGAGCTGAATGCCCATCATGTGTTCATGTACATGGGTTCCAATCCGGCTAACGACAATGCTACATTTGTGGAAGA
TAACTCGTTGCCATCGTTCTCAAGGGCTGTTAATCAGCGGGATGCTGACCTGGTTTACTTCTGGCAGAAGTACCGCAAAT
TGGCTGAGAGTTCTCCTGAGAAAAACGAAGCTCGGAAGCAATTGCTTGAAATGATGGCACACAGATCTCATGTTGACAAC
AGTGTTGAGCTGATCGGAAACCTTCTCTTTGGCTCTGAGGAAGGCCCAAGGGTTCTAAAGGCTGTTCGTGCAACTGGCGA
ACCTCTTGTTGATGACTGGAGCTGTCTCAAGTCTATGGTACGCGCTTTTGAAGCACAATGCGGCTCGCTAGCGCAGTATG
GAATGAAGCATACGCGTTCCTTTGCAAACATCTGCAATGCTGGCATCTCTGCTGAAGCGATGGCAAAGGTTGCTGCGCAG
GCTTGCACCAGCATTCCCTCCATCCCCTGGAGTTCCACCCATAGGGGTTTTAGTGCTTAA
ATGGCGGCGCGCGCTCGCCTCCGCCTCGTCCTGCCCCCGCTCGCGGCGCTGCTCCTCTTCGCGCACCTCGCCGTCGCGGT
GGCGCGGCCGCGGTGGGAGGAGGAGGGCAGCAACCTCCGCCTGCCGTCGGAGCGCGGCGTGGCGGCGGCCATGGCGGACG
ACGCCGCCGAGGCCGCCGAGGGCACCAGGTGGGCCGTCCTCATCGCCGGCTCCAACGGCTACTACAACTACCGCCACCAG
GCGGATGTCTGCCATGCCTACCAGATCATGAAGAGGGGCGGGCTCAAGGACGAGAACATCATCGTCTTCATGTACGATGA
CATCGCGCACAACCCGGAGAATCCGAGGCCTGGTGTCATCATCAACCATCCCCAGGGTGGCGATGTCTATGCTGGGGTCC
CGAAGGATTACACTGGGAAGGAGGTTAATGTCAAGAACTTGTTTGCTGTTCTGCTCGGTAACAAAACTGCTGTCAAAGGT
GGGAGTGGCAAAGTCCTGGACAGTGGCCCCAACGATCATATTTTCATTTTTTACAGTGACCATGGGGGTCCTGGTGTCCT
TGGGATGCCAACCTATCCATACCTCTACGGTGATGATCTTGTAGATGTTCTGAAGAAGAAGCATGCTGCTGGGACGTACA
AAAGCCTGGTCTTTTACCTTGAAGCCTGTGAATCTGGAAGCATCTTTGAGGGTCTATTGCCATATGACATCAATGTTTAT
GCCACCACTGCATCAAATGCTGATGAGAGCAGCTGGGGAACATACTGCCCCGGGGAGTACCCAAGCCCACCTCCGGAGTA
CGACACATGCCTGGGGGACTTGTACAGCGTTGCTTGGATGGAAGACAGCGATGTCCACAACCTGAGAACTGAATCACTCA
AGCAGCAGTACAATCTCGTCAAGGAAAGGACATCTGTGCAGCACACATATTACTCTGGGTCACATGTGATGGAATACGGT
TCTTTAGAGCTGAATGCCCATCATGTGTTCATGTACATGGGTTCCAATCCGGCTAACGACAATGCTACATTTGTGGAAGA
TAACTCGTTGCCATCGTTCTCAAGGGCTGTTAATCAGCGGGATGCTGACCTGGTTTACTTCTGGCAGAAGTACCGCAAAT
TGGCTGAGAGTTCTCCTGAGAAAAACGAAGCTCGGAAGCAATTGCTTGAAATGATGGCACACAGATCTCATGTTGACAAC
AGTGTTGAGCTGATCGGAAACCTTCTCTTTGGCTCTGAGGAAGGCCCAAGGGTTCTAAAGGCTGTTCGTGCAACTGGCGA
ACCTCTTGTTGATGACTGGAGCTGTCTCAAGTCTATGGTACGCGCTTTTGAAGCACAATGCGGCTCGCTAGCGCAGTATG
GAATGAAGCATACGCGTTCCTTTGCAAACATCTGCAATGCTGGCATCTCTGCTGAAGCGATGGCAAAGGTTGCTGCGCAG
GCTTGCACCAGCATTCCCTCCATCCCCTGGAGTTCCACCCATAGGGGTTTTAGTGCTTAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Zea mays | GRMZM2G093032 | ortholog_one2many | 1 retrogene | |
| Oryza longistaminata | KN538817.1_FG009 | ortholog_one2one | 1 retrogene | |
| Oryza brachyantha | OB01G29280 | ortholog_one2one | 1 retrogene | |
| Oryza barthii | OBART01G19640 | ortholog_one2one | 1 retrogene | |
| Oryza meridionalis | OMERI01G18100 | ortholog_one2one | 1 retrogene | |
| Oryza punctata | OPUNC01G20010 | ortholog_one2one | 1 retrogene | |
| Oryza glaberrima | ORGLA01G0161200 | ortholog_one2one | 1 retrogene | |
| Oryza sativa japonica | OS01G0559600 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_oglu_32 | 68.75 | 56.51 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all OGLUM01G23260 retrocopies