Parental gene:

OPUNC05G01050

Aliases:None
Description:None
Organism:Red rice (Oryza punctata)
Coordinates:5:812301..814331(-)


>OPUNC05G01050
ATGGCGTCCGTGGATCTGACCCCGAGGCTGCCGAGGAAGGCGTACGGCGGCGATGGTGGAACCTACTACGAGTGGAGCCC
CGCCGACCTGGCCATGCTGGAAATCGCCAACATCGGCGCCGCCAAGCTCTCCCTCGTCGCCGGTGGCTTCTCCCTGCCCA
GCTTCTCTGACTCCGGCAAGGTCGCCTATGTCCTCCAAGGCAAGGGCACCTGTGGCATTGTTCTACCTGAGGCAAGCAAG
GAGAAGGTGTTAGCCGTGAAGGAGGGCGACGCGCTGGCTCTCCCCTTCGGCGTGGTCACCTGGTGGCACAACCTCCCGGA
GTCCACCACCGAGCTCGTCGTCCTCTTCCTCGGCGACACCTCCAAGGCCCACAAGCCCGGCCAGTTCACCAACATGCAGC
TCACCGGCGCCACCGGCATCTTCACCGGCTTCTCCACCGAGTTTGTCGGCCGCGCATGGGACCTTGCCGAGTCCGACGCT
GCCAAGCTGGTGTCCAGCCAGCCTGCCTCCGGCATCGTCAAGCTCAAGTCCGCCCAGAAGCTCCCCGAGCCATCTCCCGC
CGACCGTGAGGGCATGGCGCTCAACTGCCTCGAGGCGCCGCTCGACGTGGACATCAAGAATGGCGGCCGCGTGGTGGTGC
TCAACACCGCGAACCTGCCGCTGGTGAAGGAGGTCGGGCTCGGCGCCGACCTGGTGAGGATCGACGGCCACTCCATGTGC
TCGCCGGGATTCTCTTGCGACTCCGCGTACCAGGTCACCTACATCGTCCGCGGCAGCGGCCGTGTCCAGGTGGTCGGCAT
CGACGGGAAACGCGTCCTGGAGGCCCGCGTCGAGGCTGGGAATCTCTTCATCGTGCCTCGCTTCTTCGTCGTCTCTAAGA
TCGCTGACGCCTCTGGCTTGCAGTGGTTCTCCATCATTACCACCCCCAACCCGATCTTCAGCCACCTGGCTGGGAGGACA
TCGGTGTGGAAGGCGATCTCGCCGGAGGTGCTGGAGGTGTCGTTCAACACGACGCCGGAGATGGAGAAGCTGTTCCGGTC
GAAGAGGCTGGACTCGGAGATCTTCTTCGCGCCCAACTGA

Species Parental gene accession Homology type Retrogenes number
Oryza sativa indica BGIOSGA018931 ortholog_one2many 1 retrogene
retro_oind_1,
Oryza brachyantha OB05G11140 ortholog_one2one 1 retrogene
retro_obra_13,
Oryza glumaepatula OGLUM05G01170 ortholog_one2one 1 retrogene
retro_oglu_9,
Oryza nivara ONIVA05G01190 ortholog_one2one 1 retrogene
retro_oniv_21,
Oryza glaberrima ORGLA05G0012000 ortholog_one2one 1 retrogene
retro_ogla_28,
Oryza rufipogon ORUFI05G01180 ortholog_one2one 1 retrogene
retro_oruf_6,
Oryza sativa japonica OS05G0116000 ortholog_one2one 1 retrogene
retro_osat_27,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_opun_21 80.50 99.44
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Download FASTA sequences of all OPUNC05G01050 retrocopies