RetrogeneDB ID: | retro_amel_1773 | ||
Retrocopylocation | Organism: | Panda (Ailuropoda melanoleuca) | |
Coordinates: | GL194270.1:189075..189588(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | CNBP | ||
Ensembl ID: | ENSAMEG00000015334 | ||
Aliases: | None | ||
Description: | CCHC-type zinc finger, nucleic acid binding protein [Source:HGNC Symbol;Acc:13164] |
Percent Identity: | 70.95 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MSSNECFKCGRSGHWARECPTGGGRGRGMRSRGRGGFTSDRGFQFVSSSLPDICYRCGESGHLAKDCDLQ |
MSSNECFK....G.W......G..R..G..SRGRG.....R.....S..LPDICYRCGESGH.AKDCD.. | |
Retrocopy | MSSNECFK----GGWSGHWARGCPRAGG--SRGRGARGRGRASPSSSTNLPDICYRCGESGHHAKDCDFL |
Parental | EDVEACYNCGRGGHIAKDCKEPKREREQCCYNCGKPGHLARDCDHADEQKCYSCGEFGHIQKDCTKVKCY |
E....CYNCGR.GHIAKDC.E.KRE.EQCCY.CG.PGHLARDCD...E.KCYSCGE.GHIQKDC..VKCY | |
Retrocopy | EAL--CYNCGRSGHIAKDCIERKRESEQCCYTCGRPGHLARDCDRQEEPKCYSCGEYGHIQKDCSQVKCY |
Parental | RCGETGHVAINCSKTSEVNCYRCGESGHLARECTIEATA |
RCGETGH.AINCSKTSEVNCYRCGESGHLAREC..EATA | |
Retrocopy | RCGETGHMAINCSKTSEVNCYRCGESGHLARECPMEATA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |