RetrogeneDB ID: | retro_etel_1165 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_220889:233..460(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | UBA52 | ||
Ensembl ID: | ENSETEG00000003392 | ||
Aliases: | None | ||
Description: | ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:HGNC Symbol;Acc:12458] |
Percent Identity: | 85.71 % |
Parental protein coverage: | 59.38 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTL-HL |
MQIFVKTLTG..I.LEV.PSDTIE.VKAKIQDKEG.PPDQQRLIFAGKQLE.GRTLSDY..QK.STL.HL | |
Retrocopy | MQIFVKTLTGRPIPLEVDPSDTIEDVKAKIQDKEGMPPDQQRLIFAGKQLEEGRTLSDYSVQKASTL<HL |
Parental | VLRLRGG |
VLRLRGG | |
Retrocopy | VLRLRGG |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |